Quercus suber (cork oak): 111984800
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Entry
111984800 CDS
T05868
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111984800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
111984800
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111984800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
SMC_N
AAA
AAA_23
Arf
ORC-CDC6-like
AAA_30
Zeta_toxin
nSTAND3
Motif
Other DBs
NCBI-GeneID:
111984800
NCBI-ProteinID:
XP_065620183
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MGLKQSEKSEPMIEINGLKFTYPGIDGHPPPGSTPLIEDFSLSLHSGDRCLLVGSNGAGK
TTILKILGGKHLVEPHMVRILGRSAFHDTTLTSSGDLSYLGGEWKREVAFAGFEVAIQMD
VSAEKMIYGVAGIDPQRRDELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLD
EITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPSHVVYVAHGKLQLAMPM
DKVKEISKLSLMRTVESWLRKERDEERKRRKERKACGLPEFEKQIEGSRVTGDPARAAAR
ALNNGWAAGRLHSTIAGEENFVLSSNRVLR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaagcaaagtgaaaagtcagagccaatgatagagatcaacggtctaaaattc
acgtacccaggaatcgacggtcatcctccgccgggttccactcctttaatcgaagatttc
tctctctctcttcactcgggtgatcgctgcctccttgttggatccaatggcgctggtaaa
acgacaattctgaagatattgggagggaagcacttggttgaaccccatatggtccgcata
cttggaagatcggcatttcatgacaccacattgacttcttctggtgatctcagctatctt
ggtggcgagtggaagcgagaagttgcgtttgccgggtttgaggttgcaatacaaatggat
gtttctgcagaaaaaatgatatatggagttgcaggtattgatcctcaaagaagagatgag
ttaattaaggtactggatatcaatctatcatggaggatgcacaaggtatctgatggtcag
agaagacgagtgcaaatatgtatgggtcttctcaagccattcaaggtccttcttcttgat
gagataacagttgaccttgatgttctagcaagggctgaccttctgaagtttttaagaaag
gagtgtgaagagcgaggtgccacaatcatctatgcaacacatatatttgatggcctagag
aactggccatctcatgtagtttatgtggctcatgggaagttgcaattagcgatgcctatg
gataaagtcaaggaaatcagcaaactgtcactaatgagaacagttgaaagttggctgagg
aaagaacgagatgaggagaggaagagaaggaaagagagaaaagcatgtggacttccagaa
tttgagaaacaaattgaaggaagtcgtgtgactggtgatccagcccgtgctgccgctcga
gcacttaacaatggttgggcagcaggccggttgcattccaccattgctggagaagagaac
tttgttttaagctcaaatagagttctgagatag
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