Quercus suber (cork oak): 111988490
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Entry
111988490 CDS
T05868
Name
(RefSeq) transcription factor PIF3 isoform X2
KO
K12126
phytochrome-interacting factor 3
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04075
Plant hormone signal transduction
qsu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111988490
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111988490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qsu03000
]
111988490
Transcription factors [BR:
qsu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111988490
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
111988490
NCBI-ProteinID:
XP_023876059
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All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MLESTKPRMTSSLSSLASTSEDDFVELVWENGEIFKRDRSGKTQKGHSCIGYNLFPSHAQ
VENRANVHMKRARLGNESSFSDFLGHKDGDLDFTSNNSSQNGYHLDSFSGLSKCKLEQNN
SKSKDKHPKDSQVVLKHDTANFRHGNASKFVLRNSKLATSRSTQLHPPSLFGQDSDSLVT
MGGLLKSTLPEHDSLPDKKTGTVKVSYLRPAALPTVNSQCSGVIRQASSLVLSRAEELKG
SSDERPALFSSNPFESTVIELGSGSKTVLQNQPDAELTAPISKTKESLPDEHSEAFGRRN
HKSHDQLLGQASRLAANTPGEKPNIQQFIEPLVASSSIYSLGASNEPTYSLRRTYDDTEE
SEYRSEVITKNIEEPQTKQAPARGGTGTKRSRTAEVHNFSERRRRDKINKKMRALKEIIP
NCSKVGRVSILDEAIEYTKTLQLQLKIMSMGAVVYMPPMMSPMLMQHINAPHLTHFSPMG
TGMGMRMGTRMGCSPTQFPTSQVGATALPGITGTGFQMLGLPGQSLPMSVSHAPFIPMIG
GSSTQSFPASGISGAAPPVECASLTSSKGSIQNINSELMNNANTECSKIQTSSQLAATSV
QKIIY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaatcaacaaaaccgaggatgactagcagcttgtcttctctagcttctacgtct
gaggatgactttgtggagctagtatgggaaaatggtgagatttttaagcgagatcgatca
ggaaaaactcaaaagggtcattcatgcattgggtataatttattcccttcccatgctcag
gtggagaatagagcaaacgtgcatatgaagagagcaaggttagggaatgagtcctcattc
tcagatttcttaggtcacaaggatggtgacttggactttaccagtaacaattcttcacaa
aatggttatcatcttgactcgttcagcggattgtctaaatgcaaattggaacaaaataac
agtaagagcaaagacaagcaccccaaagattcccaagttgttttgaaacatgacactgca
aatttcagacatggtaatgcatctaagtttgtactgaggaattccaagcttgctacctct
aggagtactcagcttcatccaccttccttgtttggccaagattcagattcacttgtaaca
atgggtggactgctcaaatcgaccttgcctgagcatgattcattacctgataagaaaact
gggacggtgaaggtctcctacttaagacctgcagctcttcctacagttaatagtcagtgc
agcggtgtgatcaggcaggcaagcagtctggttttatcaagagctgaggaattgaaaggc
agcagtgatgagaggcctgctctatttagtagcaacccctttgagtcaacagtgattgaa
ctaggcagtggttcaaaaacagttcttcagaatcaaccagatgcagagctaacagcacct
atttccaagaccaaggagtcactccctgatgagcactctgaagcttttggccgtaggaat
cataaatctcatgatcaacttctaggccaagcctcaaggttagcagcaaatacacctggc
gaaaaacccaatatccaacagtttattgagccactggttgcatcttcttcaatatactca
cttggagcttcaaatgagccaacatattctttgaggaggacatatgatgacacggaggaa
tccgaatatcgaagtgaagtaattacaaagaatattgaagaaccacagacaaaacaggca
cctgctcgtggaggtacaggtaccaagagaagccgaactgcagaagttcataatttttct
gaaaggaggcgaagagataaaataaacaaaaagatgcgtgcattaaaagagatcataccc
aattgcagtaaggtgggcagagtttcaattcttgacgaggccattgagtatacgaaaacc
cttcagcttcaactaaagattatgtcaatgggagctgttgtttatatgcctccgatgatg
tcacctatgctgatgcaacatatcaatgcaccacatttgacacatttctcccccatgggt
actgggatgggtatgagaatgggcaccagaatgggttgcagcccaacacagttccctact
tcacaagtaggagccactgctctgcctgggatcacaggaactggttttcaaatgcttgga
cttcctggccaatcattgcccatgtcagtttcacatgcacccttcattcctatgattgga
ggatcctctacacaatcatttccggcatctggtatctctggagctgccccccctgtggag
tgtgcttccctaacaagttcaaagggttccattcagaacataaactcagaattgatgaac
aatgcaaacactgaatgctcaaaaatccaaacatcaagtcagcttgcagcaacaagtgtc
caaaaaatcatttattga
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