Quercus suber (cork oak): 112000967
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Entry
112000967 CDS
T05868
Name
(RefSeq) transcription factor PIF3
KO
K12126
phytochrome-interacting factor 3
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04075
Plant hormone signal transduction
qsu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112000967
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112000967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qsu03000
]
112000967
Transcription factors [BR:
qsu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112000967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
112000967
NCBI-ProteinID:
XP_023888905
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MPLSELYRMAKGKLESTREKNTTCSNDLSFLPENDLFELVWENGQILKQGQSSRARKSPT
RNNFQSHCLPSYTSKIRDKDIGNGSNSKMGKFGGMESVLNEIPMSVPSDEMDLSQDDDMM
PWLNYPIDDSLQHEYCSEFLPELSGVTVNELSNQNNLASIDKRSSCNLVYRDCHTNSVND
VVSLGQGNVSKVSSVGVGEATRPRTTPLYPSSSQQCQTSFSSLRSRVTDGAGNNTSSVMH
RAVCGDSTLVASAAAGFPTIKMQKKDQMSSNNNSNLMNFSHFSRPAALVKANLQNMGLMA
GSDLSSMERITSKDKGSAASIKLPPESTHIKSISGLQKESSSHCQPLAAPAPVPAPSKVD
LKPSEDKPVEETVASKQSEAVCPDEASRNDNISNQVFSESATKGLPDGEKTTEPVVASSS
VCSGNSVERASDDLTHNLKRKFRDTEESECHSEDIEEESIGAKKAASGRAGTGSKRSRAA
EVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGF
YMPPMILPTGMQHMSAPHMAHFSPMGIGMGMGMGMGYGMGMPDMNVGPSGYPMIQVPPMQ
GAHFPSPPVSGHTAMHGMAGSNLQMFGLPGQGLPMPMPRAPLIPLSGGPVMKSATGLNAC
GVVGPVENVDSAPASSSKDPMQNVNSQAMQITGASSSMTQTSSQCPATNARFEPSSLVQN
NGQVSDVVGSTAVNSANGNDLVPGKPA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtctgagctgtatcgaatggctaaaggaaagcttgagtctactagggaaaag
aacaccacttgttcaaatgatctgtcttttctaccagagaatgatctttttgagctggta
tgggaaaatggtcagattttgaagcaaggtcagtccagtagagctagaaagagcccaact
aggaacaactttcaatctcactgtttaccatcttacacctctaagataagagataaagat
atagggaatggcagcaattcaaagatgggaaagtttgggggaatggagtctgtattgaat
gaaatcccaatgtcagtgccatcagatgaaatggatttgagtcaagatgatgacatgatg
ccttggttgaattatccaattgatgattctttacaacatgaatattgttctgagttcttg
cctgaattatctggggtcactgtaaatgaactatccaaccagaataatttggcatctatc
gacaaaagaagtagttgtaatttggtatatagggattgccatactaattcagtaaatgat
gttgtgagtttaggacaggggaatgtgtcaaaagtttcttcagtaggagtaggtgaggcc
acaagacctagaactactcctttatacccatcatcatcacaacaatgtcaaacatccttt
tcatctcttagatcaagggttacagatggcgctggcaataatacgagcagtgtcatgcac
cgtgctgtatgcggggattcaacactggttgcatctgctgcagctggatttcctactata
aagatgcagaagaaagatcaaatgtcatctaacaataactccaatctgatgaatttctct
catttctcacgtcctgctgctcttgtgaaggctaatcttcagaacatgggcctcatggct
ggttccgatttatcaagcatggaaaggataacaagtaaggataaaggttctgctgcaagt
attaaacttcctcctgaatcaacacatatcaaatccattagtggtttacaaaaagaatca
agttcccattgtcaacctcttgctgcgcctgcgcctgtgcctgcgccatccaaggttgat
ttaaaaccatcagaggataagcctgttgaggaaacagttgccagtaaacaatctgaggct
gtctgtccagatgaggcctctaggaatgacaatatctccaatcaagtcttcagtgaaagt
gcgacaaagggactgccagatggtgagaagactacagagcctgttgttgcttcttcttct
gtttgctcaggcaatagcgtcgagagagcttccgatgatctaacacataatttgaagaga
aaatttcgtgacactgaagagtccgaatgccatagtgaagacattgaagaggaatcaatt
ggggcaaaaaaagcagcttctggccgagcaggtacaggttcaaagagaagccgggcagca
gaagtgcataatttatccgaaaggaggcgaagagataggatcaatgagaagatgcgtgcc
ttgcaagaacttattccaaactgcaataaggtggacaaagcttcaatgcttgatgaggcc
atagagtatctgaagacacttcaacttcaagtgcaaattatgtcaatgggagctggtttt
tatatgcctccaatgatattaccaactggaatgcagcacatgagtgcacctcatatggct
catttctctcctatgggcattggaatgggaatgggaatgggaatgggctatgggatgggt
atgccagacatgaacgttggaccttcgggttaccctatgattcaagtgccccccatgcaa
ggagcacatttccccagcccacctgtatcaggacacactgctatgcatgggatggccgga
tctaaccttcagatgtttgggcttcctggtcaaggacttccaatgccaatgcctcgtgca
ccattaattcctttgtcgggagggcctgttatgaagtctgccacaggacttaatgcctgt
ggggttgtaggtcctgtggaaaatgtggattcagctccagcctctagctcaaaggatcca
atgcagaatgttaattctcaagcaatgcaaatcactggtgctagtagctcaatgactcag
acatctagtcagtgtccagcaacaaatgcaagatttgaaccatcttctttggtgcaaaat
aatggtcaagtctcagatgttgttggcagcacagctgttaactctgcaaatggaaatgac
cttgtgcctggtaaaccagcttga
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