KEGG   Quercus suber (cork oak): 112035020
Entry
112035020         CDS       T05868                                 
Name
(RefSeq) switch 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
qsu  Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:qsu03400]
    112035020
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    112035020
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 SWI2_SNF2
Other DBs
NCBI-GeneID: 112035020
NCBI-ProteinID: XP_023923613
LinkDB
Position
Unknown
AA seq 879 aa
MSLHIFKETLKPCTKNLSSSLNSTSITQSFDPIIPRKPPKSTLSQQLLRLQDPETLSQLQ
KPHCLPNQQPQGHSDEEEKEEAEEPDGFGRPSKLGQFQFEHTGPFEPLVLSSQGEIPVVQ
VPASINCRLLEHQRVGVKFLYSLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDREGVD
STIMDQVGKKGPVLIICPTSVIHNWEDEFSKWATFSVSIYHGANRDLIYDKLEAHAVEIL
ITSFDTYRIYGSILSEVKWEIVIVDEAHRLKNEKSKLYGACLEIKTPKRFGLTGTVMQNK
IMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPERFVRVADKRKQHLVAVLQKY
MLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYSRMLQLPDIQCLINKDLPCSCGSPLT
QVECCKRTVPNGVIWPYLHRDNPDGCDSCPFCLVLPCLVKLQQISNHLELIKPNHKDDPD
KQRKDAEFASAVFGPDIDLAGGNTQSESFMGLSDVKHCGKMRALEKLMLSWVLHGDKVLL
FSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKLVFLISTRAGGLG
LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVVFRLLAAGSLEELVYSRQVYKQ
QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSEIIELHENQGHKHR
DHLTTKKGLTELGNNFVSSKEVGVTFSSESETRVPTRVPSDSERVKRSKPVLEDMGIVYA
HRNEDIVNAGPGIQGKLDISIPQNDSHIPAARRSKPDGVSEKENVPSIKDRKRSQYGLIA
RFAGMGEFEFSKWLLSATPLEREKVLRDYKKRKEKLPNG
NT seq 2640 nt   +upstreamnt  +downstreamnt
atgtcactgcacatcttcaaagaaaccctcaagccctgcaccaaaaacttatcttcatca
ttgaattccacatccataacccaaagctttgaccccataatccctagaaaacctccaaag
tccactctctctcaacagcttctgcgcctccaagacccagagactctgtcccaactccaa
aaaccacattgcttacctaaccaacaacctcaaggtcatagcgatgaagaagaaaaggaa
gaggcagaagaaccagatgggtttgggagaccctccaaattgggtcagtttcagtttgag
catacaggaccctttgagccattggttctgtcctcacagggtgaaattccagttgtacag
gttcccgcgtctatcaactgtaggttgcttgaacatcagagagtaggtgtgaagttttta
tatagtttatacaagaacaaccatggaggcattcttggagatgacatgggacttggcaag
accattcaaacaattgccttcctggctgctgtatatggtaaagacagagaaggtgttgat
tcaacaataatggatcaggtaggcaaaaagggccccgtactaataatttgccccacttct
gttatccataattgggaggatgagttctctaagtgggcaacctttagtgtttctatttac
catggtgcaaaccgcgatctgatatacgacaagttagaagcacatgcagttgagatactt
attaccagttttgacacatacagaatttatggcagcatcttgtctgaggttaagtgggag
attgtaattgttgatgaggcacaccggcttaagaatgaaaagtcaaagctttatggagca
tgtttagaaattaaaaccccaaaacgttttggtctgaccggaaccgtaatgcagaataaa
ataatggaattatttaatctctttgactgggttgcaccaggatctttgggaacaagggaa
catttccgggagttttatgatgaacccctcaagcatggtcagaggtcaactgctcctgag
agatttgttcgggttgctgacaagcgaaaacagcacctagtggcagttcttcagaaatat
atgttgagaaggactaaggaggagactattggccatcttatgatgggaaaggaagataat
gttgtgttctgtgccatgagtgaattgcaaaaacgggtttatagtagaatgttacaacta
ccagacatccagtgccttataaataaggaccttccatgtagctgcggaagccctcttact
caagttgaatgttgcaaaaggactgtaccaaatggagtaatttggccttatcttcacagg
gacaatcctgatgggtgtgattcatgccccttttgccttgtcctcccctgccttgttaag
ttgcaacagataagtaatcacctggagttgattaagcctaaccataaggatgatccagat
aaacaaagaaaagatgcagagtttgcctctgctgtctttggccctgatattgatttggca
ggaggaaacacccaaagtgaaagtttcatgggcctaagtgatgtcaaacattgtggcaaa
atgcgagcactggaaaagctaatgctttcatgggttttgcacggcgataaagttcttttg
ttcagttactctgttaggatgctggacatactggaaaaatttcttatacgcaaaggctac
tgcttctcaaggcttgatggttccaccccaaccaacttgcgccagtctctagttgatgac
ttcaattcaagtccaagcaaactagtgtttctcatatcaacccgagctggtgggcttgga
ttaaatcttgtcagtgcaaatcgcgtggtaattttcgatccaaactggaatcctgcccaa
gacttacaggcccaggataggtcctttcgatttggacagaagcggcatgttgtggttttt
cgccttcttgcagctggttcccttgaggaacttgtttattcccgtcaagtgtataaacag
cagctatcaaatatagccgtttctggaaaattggaaaaacggtactttgaaggtgttcag
gattgcaaggaatttcaaggcgagctttttggaatctgcaatttatttcgtgatctatct
gataagctctttaccagtgaaatcatcgaattacatgaaaatcagggacacaaacatcgg
gatcatcttactacgaaaaaaggattaactgaacttggaaacaattttgtttcatccaag
gaagtgggcgttacattttcatctgagtctgaaaccagagtgccaaccagagtgcctagt
gactctgagagggttaaaagaagtaaaccagtgcttgaagacatgggcattgtatatgct
catcgtaatgaagacattgtcaatgctggacctgggattcaagggaagttggatataagc
atccctcagaatgatagccatatccctgcagcaaggaggagcaaaccagatggtgtaagt
gagaaagaaaatgttccttcaatcaaagaccggaagagaagccaatatggtctcattgct
cggttcgcgggtatgggagaatttgaatttagcaagtggttactttctgcaactcctttg
gagagggagaaagtgcttcgagactacaaaaagaggaaggagaagttacctaatggttga

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