Quercus suber (cork oak): 136064798
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Entry
136064798 CDS
T05868
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04075
Plant hormone signal transduction
qsu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
136064798
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
136064798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qsu03000
]
136064798
Transcription factors [BR:
qsu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
136064798
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_IRO3
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
136064798
NCBI-ProteinID:
XP_065623104
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MAEEMLESTKPRMTSSLSSLASTSEDDFVELVWENGEIFKRDRSGKTQKGHSCIGYNLFP
SHAQVENRANVHMKRARLGNESSFSDFLGHKDGDLDFTSNNSSQNGYHLDSFSGLSKCKL
EQNNSKSKDKHPKDSQVVLKHDTANFRHGNASKFVLRNSKLATSRSTQLHPPSLFGQDSD
SLVTMGGLLKSTLPEHDSLPDKKTGTVKVSYLRPAALPTVNSQCSGVIRQASSLVLSRAE
ELKGSSDERPALFSSNPFESTVIELGSGSKTVLQNQPDAELTAPISKTKESLPDEHSEAF
GRRNHKSHDQLLGQASRLAANTPGEKPNIQQFIEPLVASSSIYSLGASNEPTYSLRRTYD
DTEESEYRSEVITKNIEEPQTKQAPARGGTGTKRSRTAEVHNFSERRRRDKINKKMRALK
EIIPNCSKVGRVSILDEAIEYTKTLQLQLKIMSMGAVVYMPPMMSPMLMQHINAPHLTHF
SPMGTGMGMRMGTRMGCSPTQFPTSQVGATALPGITGTGFQMLGLPGQSLPMSVSHAPFI
PMIGGSSTQSFPASGISGAAPPVECASLTSSKGSIQNINSELMNNANTECSKIQTSSQLA
ATSVQKIIY
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagatgcttgaatcaacaaaaccgaggatgactagcagcttgtcttctcta
gcttctacgtctgaggatgactttgtggagctagtatgggaaaatggtgagatttttaag
cgagatcgatcaggaaaaactcaaaagggtcattcatgcattgggtataatttattccct
tcccatgctcaggtggagaatagagcaaacgtgcatatgaagagagcaaggttagggaat
gagtcctcattctcagatttcttaggtcacaaggatggtgacttggactttaccagtaac
aattcttcacaaaatggttatcatcttgactcgttcagcggattgtctaaatgcaaattg
gaacaaaataacagtaagagcaaagacaagcaccccaaagattcccaagttgttttgaaa
catgacactgcaaatttcagacatggtaatgcatctaagtttgtactgaggaattccaag
cttgctacctctaggagtactcagcttcatccaccttccttgtttggccaagattcagat
tcacttgtaacaatgggtggactgctcaaatcgaccttgcctgagcatgattcattacct
gataagaaaactgggacggtgaaggtctcctacttaagacctgcagctcttcctacagtt
aatagtcagtgcagcggtgtgatcaggcaggcaagcagtctggttttatcaagagctgag
gaattgaaaggcagcagtgatgagaggcctgctctatttagtagcaacccctttgagtca
acagtgattgaactaggcagtggttcaaaaacagttcttcagaatcaaccagatgcagag
ctaacagcacctatttccaagaccaaggagtcactccctgatgagcactctgaagctttt
ggccgtaggaatcataaatctcatgatcaacttctaggccaagcctcaaggttagcagca
aatacacctggcgaaaaacccaatatccaacagtttattgagccactggttgcatcttct
tcaatatactcacttggagcttcaaatgagccaacatattctttgaggaggacatatgat
gacacggaggaatccgaatatcgaagtgaagtaattacaaagaatattgaagaaccacag
acaaaacaggcacctgctcgtggaggtacaggtaccaagagaagccgaactgcagaagtt
cataatttttctgaaaggaggcgaagagataaaataaacaaaaagatgcgtgcattaaaa
gagatcatacccaattgcagtaaggtgggcagagtttcaattcttgacgaggccattgag
tatacgaaaacccttcagcttcaactaaagattatgtcaatgggagctgttgtttatatg
cctccgatgatgtcacctatgctgatgcaacatatcaatgcaccacatttgacacatttc
tcccccatgggtactgggatgggtatgagaatgggcaccagaatgggttgcagcccaaca
cagttccctacttcacaagtaggagccactgctctgcctgggatcacaggaactggtttt
caaatgcttggacttcctggccaatcattgcccatgtcagtttcacatgcacccttcatt
cctatgattggaggatcctctacacaatcatttccggcatctggtatctctggagctgcc
ccccctgtggagtgtgcttccctaacaagttcaaagggttccattcagaacataaactca
gaattgatgaacaatgcaaacactgaatgctcaaaaatccaaacatcaagtcagcttgca
gcaacaagtgtccaaaaaatcatttattga
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