Rahnella aquatilis HX2: Q7S_20890
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Entry
Q7S_20890 CDS
T01850
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
raa
Rahnella aquatilis HX2
Pathway
raa00270
Cysteine and methionine metabolism
raa00450
Selenocompound metabolism
raa00670
One carbon pool by folate
raa01100
Metabolic pathways
raa01110
Biosynthesis of secondary metabolites
raa01230
Biosynthesis of amino acids
raa04981
Folate transport and metabolism
Module
raa_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Q7S_20890 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Q7S_20890 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Q7S_20890 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Q7S_20890 (metH)
04980 Cobalamin transport and metabolism
Q7S_20890 (metH)
Enzymes [BR:
raa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
Q7S_20890 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AFE60387
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Position
complement(4567728..4571411)
Genome browser
AA seq
1227 aa
AA seq
DB search
MTNRVEALHKQLAQRILVLDGGMGTMIQSYRLEEEDYRGERFADWESDLKGNNDLLVLSK
PDVIVEIHNGYLAAGADILETNTFNSTTIAMADYHMESLSAEINYEAARLARQCADAWTA
RTPDKPRYVAGVLGPTNRTASISPDVNDPAFRNVSFDQLVEAYRESTRALIEGGADLIMI
ETVFDTLNAKAATFAVESEFEAMGIVLPVMVSGTITDASGRTLSGQTTEAFYNSLRHVKP
LTFGLNCALGPDELRQYVAELSRIAECYVTAHPNAGLPNAFGEYDLEAKEMAEHIAEWAR
SGFLNIVGGCCGTTPAHIAAMVKAVEGVPPRALPTIPVACRLAGLEPLTIDPQTLFVNVG
ERTNVTGSARFKRLIKEEKYAEALAVARQQVESGAQIIDINMDEGMLDAEAAMVRFLSLI
AGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGEEAFLHHARMVRRYGAAV
VVMAFDETGQADTRARKIEICRRAYKLLTEKVGFPPEDIIFDPNIFAVATGIDEHNNYAV
DFIEACADIKAQLPHALISGGVSNVSFSFRGNEPVREAIHAVFLYHAIRNGMDMGIVNAG
QLAIYDDLPAELRDAVEDVILNRRDDGTERLLELAEKYRGSKDDGEANKQQAEWRSWDVK
KRLEYSLVKGITEFIELDTEECRQLAARPIEVIEGPLMDGMNVVGDLFGAGKMFLPQVVK
SARVMKQAVAYLEPYIEASKEKGQTNGKILLATVKGDVHDIGKNIVGVVLQCNNYEIIDL
GVMVPTDKILKTAIEENVDIIGLSGLITPSLDEMVNVAKEMERRGFTMPLLIGGATTSKA
HTAVKIEKNYSGVTCYVQNASRSVGVVSALLSKDQRDAFIERTRKEYDTVRIQHGRKKPR
TPPVSLEVARDNATFIDWEAYTPPVVHRLGIQKVEASIETLRNYIDWTPFFMTWSLAGKY
PRILEDEVVGEEAKRLFKDANDLLDKLCAEKLLNPRGVVGLFPANRKGDDIEIYSDERRE
DVLVVSHHLRQQTEKTDFANYCLADFVAPKSSGKKDYMGAFAVTGGLEEDALAEAYDKQH
DDYNKIMIKALADRLAEAFAEYLHEKVRKVYWGFAANENLSNEELIRENYQGIRPAPGYP
ACPEHTEKGQIWKLLDVEANTGMQLTESFAMWPGAAVSGWYFSHPDSKYFAVAQIQRDQV
EDYAARKNMPVAEVERWLAPNLGYDAD
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
gtgactaatcgagttgaggcgctacataagcagctggcacagcgcattttggttctggat
ggcggtatgggcaccatgatccaaagctatcgtctggaagaagaagattaccgtggtgag
cgttttgctgactgggaaagcgatcttaaaggcaataatgatcttctggtgctctccaaa
cccgacgtgatcgtcgagatccataacggttatcttgctgctggtgcagatatcctcgaa
accaacaccttcaactccaccacgattgcaatggctgactaccatatggaatcgctgtcg
gctgaaattaactatgaagctgcgcggctggcgcgtcaatgtgccgatgcgtggaccgcc
cgtacgccggataaaccgcgttatgttgccggggttttaggcccgaccaaccggacggcg
tcgatttccccggatgttaacgatcccgcatttcgtaacgtatctttcgatcagctggtt
gaagcctaccgcgaatccacccgggcactgatcgaaggcggtgccgatctgatcatgatc
gaaaccgtatttgacactctcaacgccaaagccgcgacgttcgcagtagaaagtgaattc
gaagcaatgggcatcgtattgcctgtcatggtttccggcacgattactgatgcttccggc
cgcaccttatctggccagacaaccgaagctttttataactcgctgcgtcacgttaaaccg
ctcacctttggccttaactgcgcgctggggccggatgagttacgtcagtatgtcgctgag
ttatctcgtattgcagaatgttatgttaccgcgcacccgaacgccggtttacctaatgct
ttcggtgaatacgatctcgaagccaaagaaatggctgagcatattgccgaatgggcacgc
tcgggctttctgaacattgtcggtggctgctgtggtaccacgcctgcgcatatcgcggcg
atggtgaaagccgtggaaggcgtaccgccccgcgctttaccgaccattcctgttgcctgt
cgtctggcagggctggaaccgctgaccatcgatccacagacgctgtttgtgaacgtcggt
gaacgtactaatgtgaccggttctgctcgtttcaagcgactgattaaagaagaaaagtat
gcggaagcgctggcggtagcccgtcagcaggtagaaagtggcgcgcaaatcatcgatatc
aacatggatgaagggatgctcgacgccgaagcggcaatggtgcgtttcctcagcctgatt
gccggtgaaccggatatcgcccgtgtgccgatcatgatcgactcctccaaatgggatgtt
atcgaaaaaggcctgaaatgcattcagggcaaggggattgttaactccatttccatgaaa
gaaggcgaagaagccttcctgcaccacgcccgtatggtacgccggtacggcgcggccgtt
gtggtcatggcattcgatgaaaccgggcaggcggatacccgcgcccgcaaaattgaaatc
tgccgccgtgcctacaagctgttgactgaaaaagtcggcttcccgccggaagacatcatt
tttgacccgaatatctttgcggtggcgaccggcattgacgaacacaacaactacgccgtc
gatttcatcgaagcctgcgccgatatcaaagcacaactgccgcatgcgctgatttccggc
ggtgtttccaatgtttcattctctttccgcggtaacgaaccggtacgtgaagccattcac
gccgtcttcctgtatcacgccatccgcaacggtatggatatgggcatcgtcaacgccggt
cagttggcgatttatgatgatttaccggctgaactgcgcgacgccgtcgaagatgtgatc
ctcaaccgccgcgatgatggtactgagcgcctgcttgaactggctgaaaaataccgtggc
agcaaggacgatggagaagcgaataagcagcaggcggaatggcgcagctgggacgtgaaa
aaacgcctcgaatactcgctggtgaaaggtattaccgaatttatcgaactggataccgaa
gagtgccgtcagctggccgcgcgtcctatcgaagtgatcgaaggcccgctgatggacggt
atgaacgtcgtcggcgacctgtttggtgccggtaaaatgttcctgccgcaagtggtgaaa
tccgcgcgcgtgatgaaacaggctgtggcctatctggagccatacattgaagccagcaag
gaaaagggccagaccaacggcaaaatcctgctggccacggtcaaaggcgatgtccatgac
atcggtaaaaacatcgttggcgtggtgctgcaatgtaataactacgagattatcgatctc
ggtgtaatggtgccgacggacaaaatcctgaaaaccgccatcgaagaaaacgtcgatatc
atcgggctttccgggctgattacgccgtcactcgatgaaatggtcaacgtcgcgaaagaa
atggagcggcgtggttttaccatgccgttgctgattggcggcgcaaccacatcgaaagcg
cacactgcggtgaaaatcgaaaaaaattacagtggtgtgacctgctacgtgcaaaacgcc
tcgcgttctgtcggcgtggtgtctgcgttgctgtcaaaagatcagcgggacgcgtttatc
gaacgtacacgtaaagagtacgacactgtacgtatccagcatggtcgtaaaaagccgcgc
acgccgccagtgagtcttgaagtggcccgcgacaacgctacttttatcgattgggaagct
tacacgccaccggtggtccatcgtctgggcatccagaaagtcgaagccagcattgaaaca
ctgcgcaattacatcgactggacgccgttcttcatgacctggtcgctggcaggtaaatat
ccgcgcattcttgaagatgaagttgtcggcgaagaagcgaaacgcctgttcaaagatgcc
aatgacctgctcgataaactttgcgctgagaaattgctcaacccacgcggcgtcgtcggt
ctcttcccggcaaaccgcaaaggcgatgacatcgaaatctacagcgatgaacgccgcgaa
gacgtgctggtggtcagccatcatctgcgtcagcaaacggaaaaaaccgatttcgccaac
tattgcctggctgactttgtcgcaccgaaatccagcggcaagaaagattacatgggggca
tttgctgtaaccggcgggctggaggaggatgcgctggccgaggcgtatgacaaacagcat
gatgattacaataaaatcatgatcaaggcgctggctgaccgtctggcagaagcgtttgcg
gaatacctgcatgagaaagtgcgcaaggtgtattggggttttgccgccaacgagaatctg
agcaacgaagagctgatccgcgagaattatcagggaatacgtccggcgcccggttacccg
gcctgtcctgaacacactgaaaaggggcaaatctggaagctgctggatgtggaagccaat
accggtatgcaactgaccgaatcctttgcgatgtggccgggtgctgcggtgtcaggctgg
tatttcagccaccctgacagcaaatacttcgccgtggcacaaatccagcgtgatcaggtc
gaagattacgcggcacgtaaaaatatgccggtcgccgaagtggagcgctggctggcgccg
aacttaggttacgacgccgactaa
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