Rodentibacter abscessus: THUN1654_09230
Help
Entry
THUN1654_09230 CDS
T10998
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rabs Rodentibacter abscessus
Pathway
rabs00540
Lipopolysaccharide biosynthesis
rabs01100
Metabolic pathways
Module
rabs_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
rabs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
THUN1654_09230 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rabs01005
]
THUN1654_09230 (lpxC)
Enzymes [BR:
rabs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
THUN1654_09230 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
rabs01005
]
Lipid A
THUN1654_09230 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
BFU60086
LinkDB
All DBs
Position
complement(1087444..1088361)
Genome browser
AA seq
305 aa
AA seq
DB search
MIKQRTLKQSIKVTGVGLHSGKKVTLTLRPAMPNTGVIYCRTDLNPPVTFPANAESVRDT
MLCTALVNEQGVRVSTVEHLNAALAGLGIDNIIVEVDAPEIPIMDGSASPFIYLLLDAGI
EEQNAAKKFIRIKQNVRVEDGDKWAEFKPYNGFRLDFTIDFEHPAIGKNVRNYVMDFSAQ
AFVHQISRARTFGFMKDIEYLQSQGLALGGSLDNAIVLDDYRILNEEGLRFKDELVRHKM
LDAIGDLYMAGYNIIGDFKAYKSGHGLNNKLLRAVLANQNAWEFVTFEDKKQVPQGYVSP
VQVLI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaaagaacattaaaacaaagtattaaagtaacgggtgttggtttacatagc
ggtaaaaaagtaactttaacattacgccctgctatgccgaataccggtgtgatttattgt
cgtacggatttgaatcctccggttactttcccggctaatgcagaatctgttcgtgatacg
atgctttgtaccgcacttgttaatgagcaaggtgtgcgtgtttcaactgttgaacactta
aacgccgcattagcaggtcttggtattgataatattattgttgaagttgatgcgcctgaa
attccgattatggacggtagtgccagcccattcatctatttattgttagatgccggtatt
gaggaacaaaatgcagcgaagaaatttattcgtattaagcaaaatgttcgtgtagaagat
ggcgacaaatgggcggaattcaaaccttataacggctttcgtttagatttcacaattgac
tttgaacatcccgcaattggaaaaaatgtgcgtaattatgtgatggatttttctgcgcaa
gcattcgttcatcaaattagtcgtgccagaacttttggttttatgaaggatattgaatat
cttcaatctcaaggattggcgttaggtggtagcttggataatgctatcgtattggatgat
tatcgtattctaaatgaagaagggctgcgttttaaagatgagttggttcgccataaaatg
ttggatgcgataggtgatctttatatggcgggttataacattatcggtgatttcaaagca
tataagtcaggtcacggcttaaataataaattacttcgggcggtacttgcaaatcaaaat
gcttgggaatttgttacctttgaagataagaaacaagtacctcaagggtatgtttcacct
gttcaggtgctgatttag
DBGET
integrated database retrieval system
