Rahnella aceris ZF458: JHW33_09045
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Entry
JHW33_09045 CDS
T07163
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
race
Rahnella aceris ZF458
Pathway
race01501
beta-Lactam resistance
race01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
race00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JHW33_09045
01503 Cationic antimicrobial peptide (CAMP) resistance
JHW33_09045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
race03036
]
JHW33_09045
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_09045
01504 Antimicrobial resistance genes [BR:
race01504
]
JHW33_09045
Chromosome and associated proteins [BR:
race03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JHW33_09045
Transporters [BR:
race02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JHW33_09045
Antimicrobial resistance genes [BR:
race01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JHW33_09045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
Beta-barrel_RND
HH_YBHG
CzcB_C
Beta-barrel_RND_2
BSH_CusB
HH_EMRA
BSH_YhbJ
HH_CzcB
HH_AAEA_pHBA
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QQN36738
LinkDB
All DBs
Position
complement(1995696..1996838)
Genome browser
AA seq
380 aa
AA seq
DB search
MFPAMSRFMAVPVLLTTLLFPLTRVAAQPLPTVTTATIATQPDGVSRTYLGRLEAVQAVN
VTSRTEGFIARRAFEEGQFVNAGDVLYEIDPALHQAAVAQAKAQLDSANATARHAQTHLN
RIQRLGDARTVSQSDVDTALAARDTARAAVAQAQAALKMQELQLSYTRITAPIAGRIGVS
HFHTGSLVNPASGALTEIVQLDPVRVVISVNERDVLSASHSSGTLEDAFSADNMTLSLRL
SDGSPYMKAPVLESLGNRIDAQTGTLPVRLTVANPDHRLLPGGTVNVAAEPRSGHSLPVL
PAQALQQNAAGHFVLLVNDGQRVEARPVRLGAQTGYGYFVIEGLQGGEKVVTEGLQWIRP
GMEVNARAATDAPDMAAKKR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgcaatgagccgttttatggcagtgccagtgctgctgacaacattattattc
cccctgacccgtgtggcggcacagcctttgccgacggtgaccactgcgaccatcgccact
caacctgatggcgtcagccggacctatctcgggcgtcttgaagctgttcaggccgtcaat
gtaaccagccggactgaaggatttatcgcccgccgggcctttgaggaggggcagtttgtg
aatgccggcgacgtcttgtatgaaatcgatcccgccttgcatcaggcggctgtcgctcag
gccaaagcccagctcgacagcgccaatgctaccgcacgccatgcacaaacccatctgaac
cgcatacagcgtctcggtgatgcgcgtaccgtcagccagtctgatgtcgataccgcgctg
gctgcccgtgataccgcccgtgcggctgtcgcgcaggcgcaggcggcgttaaaaatgcag
gaactgcaactaagctatacccgcattacggcgcccattgcagggcgcatcggcgtgagc
cattttcataccggcagtctggtgaatccggccagcggtgcactcacggaaatcgtgcaa
ctcgatccggtacgtgtggtgatttcagtgaatgaacgtgatgttctcagtgccagccac
agcagtggcacgctggaagacgctttctctgccgataacatgacgctttctctgcgctta
tcggacggttcaccttatatgaaagcgcccgtgctggaatccctcggcaatcgtattgat
gcgcaaacagggaccttgccggtcaggctgaccgtggcaaatccagaccatcgtttgctg
ccggggggcaccgtgaatgtggccgcagagccgcgttccggacattctctgccggtactg
cctgcgcaggctttgcagcaaaatgcggcagggcactttgtcttgctggtgaatgacgga
cagcgcgtggaagcacgcccggtgcgtcttggtgcacaaacgggatacggctatttcgtc
attgagggtttgcagggcggagaaaaagttgtgacagaaggcctgcaatggatccggcca
ggtatggaagtgaatgcacgggctgctacggatgccccggatatggccgcgaagaaacgt
taa
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