Rahnella aceris ZF458: JHW33_20705
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Entry
JHW33_20705 CDS
T07163
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
race
Rahnella aceris ZF458
Pathway
race01501
beta-Lactam resistance
race01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
race00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JHW33_20705
01503 Cationic antimicrobial peptide (CAMP) resistance
JHW33_20705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_20705
01504 Antimicrobial resistance genes [BR:
race01504
]
JHW33_20705
Transporters [BR:
race02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JHW33_20705
Antimicrobial resistance genes [BR:
race01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JHW33_20705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QQN34779
LinkDB
All DBs
Position
complement(4508003..4511152)
Genome browser
AA seq
1049 aa
AA seq
DB search
MSTFFINRPIFAWVVAIVIMLAGALSIMKLPISQYPNIAPPAISVSVTYPGASAETAQNT
VVQVIEQQLNGLDNLRYIESQSNSDGSATIIATFDQGTNPDIAQVQVQNKVSLAESQLPT
EVVNQGIRIAKYQANFMLLVSLISTDGKMSNSDLSNLLVTKLEDPIVRTKGVGDFLLLGS
EYAMRIWLDPAKLYKYQLVPSDVSAAIEAQNVQVSSGSLGGLPTVKDSKLSATIIGKTRF
DSIHQFKNVLLKVNADGSQVRLSDVGNVDLGPESYSISSTFNGRPSTAIALRLASGANVL
DTDRAVRETIAGLEDSLPAGVKVEFPYQTAPVVSASIEEVVKTLIEAIVLVFCVMLLFLQ
NLRATLVTTLVVPVVLLGTFGILAAAGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
TEEKLSPKDATIKSMKQIQGALFGIALVLSAVLVPMAFFGGSTGIIYRQFSITIVSAMAL
SVLMALIFTPALCATIIKHNDEEKSQKGFAGWFNRNFDKGAMRYTRAVGTVISRRRLFMG
IYLLIVIATGFMFTRVPTTFLPDEDQAVMFVQATLPANASAERTQQVLDNVREYLMTQES
GIVSSVFTANGFSFAGRGQNVGIAFVQLKTWADRPAAAQKVQALAGRAMAHFATIKDARV
FAFVPPAVMELGNATGFDFFLQDTNGKGHEALMAARNQFLQMASQDKRLMAVRPNGMEDE
PQYQLEIDDERAQALGLSLDDINNTLSAAWGSAYVNQFMYNDRVKRVYIQGKAASRVTPE
DLNNWYFRNSSGDMVPWSAFGSGKWVYGSPRYERFNGVSSVELMGSPAPGYSSGDANEAV
MEIAAKLPPGYKVAWHGLSYEEKLSGSQTPALYSLSMIVVFLCLAALYESWSIPFSVMLV
VPLGILGTIGAVLLRGLSNDVFFQVGLLTTVGLAAKNAILIVEFAKELHENEGMSVAQAA
IEAAKLRIRPIIMTSMAFVLGVFPLTISSGAGAGSQHSIGTAVVGGMLTATFLAIFFVPM
FYVTVVNLFTRKSKKHDKALPAPEATHHE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtctactttctttattaaccgccccatattcgcctgggttgtcgccatcgtcatcatg
ctcgccggtgcgctgtcgatcatgaaactgccgatcagccagtacccgaatatcgcgcct
ccggcgatttccgtcagcgtcacctatccgggtgcgtcagcggaaaccgcccagaacacc
gtagttcaggtcattgaacagcaactgaacgggctggataacctgcgctatatcgaatcg
caaagtaacagcgacggcagtgccacaatcattgccacctttgatcagggtactaacccg
gatatcgcgcaggttcaggtacagaacaaagtgtcgctggccgaatcgcaactgccgacc
gaagtggtcaatcaggggatccgtattgccaaatatcaggccaacttcatgctgctggtc
agcctgatttcgaccgacggtaaaatgagtaactcggatctgagtaacctgctggtgacc
aaactggaagacccgatcgtgcgtaccaaaggcgtcggcgacttcctgctgctcggttca
gaatacgccatgcgtatctggctcgacccggcaaaactgtataaatatcagctggtccca
agtgatgtcagcgcggcgattgaagcgcaaaacgtacaggtgtcgtccggttccctcggc
ggcctgccgacggtcaaagacagcaaactcagcgccacgatcattggtaaaacccgtttc
gacagcattcatcagttcaaaaacgtgctgctgaaagtgaacgccgacggttctcaggtg
cgtctcagtgatgtcggtaacgtggatctggggccggaaagttattccatctcctccacg
tttaacggcaggccctctaccgctatcgccctgcgtctggcaagcggcgcgaacgtactg
gacaccgacagagcagtaagagaaaccatcgccgggctggaggattctctgccggctggc
gtgaaagtcgagttcccgtaccagaccgcgccggtggtcagcgcatcgattgaggaagtg
gtgaaaacgctgatcgaagccatcgtgctggtgttctgcgtgatgttactgttcctgcaa
aacctgcgcgcaacactggtcaccacgctggtggtgccggtagtgctgctcggtaccttc
ggtattctggcggcagcggggtattccattaacaccctgaccatgttcgggatggtgctg
gcgataggcctgctggtggatgatgccatcgtggtggtggaaaacgtcgaacgtgtgatg
acggaggaaaagctctcgccgaaagacgccaccatcaaatcgatgaaacagatccagggc
gcgctgtttggtatcgcgctggtgctgtctgccgtactggtgccgatggcgttcttcggt
ggctcaaccgggatcatctaccgtcagttctcgatcaccatcgtatccgcgatggcgctt
tcggtgctgatggcgctgattttcaccccggcgctgtgcgccaccatcatcaaacacaac
gacgaggaaaaatcgcagaaaggcttcgcgggctggtttaaccgtaacttcgacaaaggc
gcgatgcgctacacccgcgccgtcggcacggtcatctcacgccgccgtctgtttatgggc
atctacctgctgatcgtgatcgccaccggctttatgttcacccgcgtgccgaccaccttc
ctgccggatgaagatcaggccgtgatgtttgttcaggcgacgttgcccgccaacgcctcg
gcggaacgaacccagcaggtgctggataacgtccgggaatatctgatgacgcaggaaagc
ggcatcgtttcctcggtgtttaccgccaatggcttcagcttcgccggacgaggccagaac
gtcgggattgccttcgtgcagttgaaaacctgggccgaccgcccggccgccgcgcaaaaa
gttcaggcgctggccggtcgtgcgatggcgcatttcgccaccatcaaagatgcccgcgta
tttgctttcgttccgccagccgttatggaactgggtaatgccaccggcttcgacttcttc
ctgcaagacaccaacggcaaggggcatgaagccctgatggccgcgcgtaaccagttcctg
caaatggcgtcacaggacaaacgcctgatggctgtgcgcccgaacgggatggaagatgaa
ccgcaatatcagctggaaattgacgatgaacgggcgcaggcgctgggtctgagcctcgac
gacatcaacaacaccttgtcagcggcctggggttcagcgtatgtgaaccagttcatgtac
aacgaccgcgtgaagcgtgtttacatccagggcaaggcggcttcccgcgtcacgcctgaa
gatctgaacaactggtatttccgtaattccagcggcgatatggtgccgtggagcgccttc
ggcagcggcaaatgggtgtacggctcaccgcgttatgaacgtttcaacggcgtgtcttcc
gtcgaactgatgggttcaccggcaccgggctacagctcgggcgatgccaacgaggcggtg
atggaaatcgcggccaaactgccaccgggttacaaagtggcatggcacggcctgagctac
gaagagaagctttccggctcacaaacaccggcgctttacagtctgtcgatgatcgtggtg
ttcctgtgtctggcggcgctgtacgagagctggtcaattccgttctccgtcatgctggtg
gtaccgctggggattttaggcaccatcggtgctgtgttgctgcgcgggttgtcgaatgat
gtcttcttccaggttggcctgctgacgaccgtcgggctggcggcgaagaacgccatattg
attgttgagttcgccaaggagctgcatgagaacgaagggatgtcggtggcacaagcggcc
atcgaagcggccaagctgcgtatccggccgatcatcatgacctcaatggccttcgtcctc
ggcgtattcccgctgaccatttccagcggcgcgggcgcgggcagccagcattccatcggg
acggcggtggtcggcggcatgctcacggccaccttcctggcgatcttcttcgtgccgatg
ttctatgtcacggttgtgaacctgttcacccgcaaatcgaaaaaacacgataaggcgctt
cctgcaccagaggcaacacaccatgaataa
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