Rahnella aceris ZF458: JHW33_25900
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Entry
JHW33_25900 CDS
T07163
Name
(GenBank) AMP-binding protein
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
race
Rahnella aceris ZF458
Pathway
race00470
D-Amino acid metabolism
race00552
Teichoic acid biosynthesis
race01100
Metabolic pathways
race01503
Cationic antimicrobial peptide (CAMP) resistance
race02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
race00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JHW33_25900
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
JHW33_25900
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JHW33_25900
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
JHW33_25900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
race01504
]
JHW33_25900
Enzymes [BR:
race01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
JHW33_25900
Antimicrobial resistance genes [BR:
race01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
JHW33_25900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QQN37752
LinkDB
All DBs
Position
pPlas2:complement(546349..547863)
Genome browser
AA seq
504 aa
AA seq
DB search
MFLSQIRPLFDRLRNCDDAIALINQQGTYSFAELGARTAAIAHFLTPLAGRNVLIYGHKQ
LDAVAAILACISKGCCFTFVDQANPPSRIEKIARMTRTEVIITTLPHPLAGLEQWPQCVS
ASLADISPATLPAEPSLTQSLFYILSTSGSTGEPKGVMVSYDNFAAFSAWFAPQVTGGTD
KGCHINHACFSFDMAILDLIPVLSRGQTVLMLDHCNNVLPRQNIRLMTREPDVAVTSWFS
TPSFAELMLKDALFSHVKFPALKRFYIGGERVAPGLITQLQTRFPALEVMHAYGPTETTC
VTHTHLLSQPLHHQAGLLPLGKPQGLNRIRIVDAAGHPVSATTVGEVRLYGPQVSQGYLP
EDHPRNQAFAEDEWGRYYATGDRGFVDENQSLFICGRDDGQFKLHGNRIELAEVESAVCR
NANVIQCCLVPLEEQGKVTDLQLFVQLHDDNALQRQALRHFLSGQLPGYMIPKQLVFCQH
FPLTLHGKIDRQELVRQYAVSDSF
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtttttatcgcaaatcagaccgctgtttgaccggcttcgcaactgtgatgacgccatc
gcgctgattaatcagcaaggcacctacagttttgctgaactgggcgcacggacggccgcc
atcgcccattttcttacccctctggcgggtcgcaatgtgctgatctacggtcataaacaa
ctcgatgcggtcgccgctattctggcctgcatcagtaaaggctgttgcttcacctttgtg
gatcaggcaaatccgccgtccagaattgaaaaaatagcccggatgacgcgcacggaagtg
atcatcaccacgctgccgcaccccctcgccgggctggagcaatggccgcagtgtgtcagt
gcttcactggcagacatttctcctgcaacgctgcccgctgaaccgtcattaacccaatct
cttttctatatcctttccacctcgggcagcaccggtgagcctaaaggcgttatggtcagt
tatgacaattttgccgctttcagcgcgtggttcgcaccgcaagtcaccggcggaacggac
aagggctgccatattaatcacgcctgtttttcttttgatatggcgatcctcgatctcatt
ccggttctcagccgcgggcagaccgtgctgatgctggatcattgcaataatgttttgccc
cggcaaaacatcaggctgatgacaagagagccagatgtggccgtcaccagttggttttca
acacccagttttgctgaactcatgcttaaagacgcgctattcagccacgttaagttcccc
gccctgaagcgtttttatatcggcggtgaacgggttgcaccaggtttgatcacacagtta
cagacgcgttttccggcgcttgaagtgatgcacgcttatggcccgaccgagacaacctgc
gtgacgcatacgcatcttttgtcccagccgctacaccatcaggcggggttattgccgctg
ggcaagccgcaagggctgaaccgcattcgcatcgtcgatgcggccggtcatccggtttct
gccacaacggtaggtgaagtcaggctttacggccctcaggtttcacagggctatctgccg
gaggatcacccccgcaatcaggcttttgctgaggatgaatggggacgctattacgccacg
ggcgatcgcggttttgtcgacgaaaaccagtcactgtttatttgcggcagagatgacgga
cagtttaagttgcatggcaatcgcattgagctggcagaagtagaatccgccgtgtgccga
aatgccaacgtgatccagtgctgtctggtaccgctcgaagaacagggaaaagtgaccgac
ctgcaactgtttgtacaactgcatgatgacaatgcgctgcagcggcaagccttacgccat
ttcttgtccgggcaactaccgggatacatgatccctaaacaactggtcttttgccaacac
ttccccctgacattgcatggcaaaatagaccggcaggaactcgtccggcaatacgcggtt
tctgacagtttttaa
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