Roseibium aggregatum: QUB73_09755
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Entry
QUB73_09755 CDS
T11280
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ragg Roseibium aggregatum
Pathway
ragg00300
Lysine biosynthesis
ragg00550
Peptidoglycan biosynthesis
ragg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QUB73_09755
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QUB73_09755
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ragg01011
]
QUB73_09755
Enzymes [BR:
ragg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
QUB73_09755
Peptidoglycan biosynthesis and degradation proteins [BR:
ragg01011
]
Precursor biosynthesis
Amino acid ligase
QUB73_09755
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
AA_permease_N
ETF
Motif
Other DBs
NCBI-ProteinID:
WJS04539
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Position
2131948..2133417
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AA seq
489 aa
AA seq
DB search
MDLEYLAAGLTLPEAAEARKITGLTADSRKVQPGFLFAAFKGASVDGTKFAPDAAAAGAI
AILCAEEAADAVRAQVPNTVAVVSAAEPRQVFARMAARFYGAQPDTIVAVTGTAGKTSVA
HFARQIFQSAGHPAASLGTLGVIKPDGESYGGLTTPDPVALHKQLAELEEEGVNHAALEA
SSHGLDQYRLDGVRLTAAAFTNLGRDHMDYHPTIEHYLNAKLRLFKELLPSGGTVVCDPG
EKYADRVMAVAQERGLPLFTVGETGRNLTLTGLKPMGAGQELTIQSARGEYKVTLPLIGR
FQVSNALIAAGLAIAAGIDTGTALRALENLKGAPGRLELAGKTPAGGLVFVDYAHKPDAL
DNALAALKPFARGTLSVIIGAGGDRDPGKRELMGEVAARRADLVIVTDDNPRSEDPATIR
KAVLVGAPDAMEIGDRYEAIAEGVRRLKDGDILCVAGKGHETGQIVGDTVIPFSDHEAVK
RAISLEGNT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgagtatttagctgccgggctgaccttgcccgaagcggcagaggctcggaaa
attacggggctgacggctgatagccgcaaagttcagccgggcttcttgtttgccgccttc
aagggggcttccgtcgacgggacaaaattcgccccggacgcagcagcggccggggctatt
gccattctgtgtgctgaagaggccgcagatgcagtgcgtgcacaggtgccgaacacggtt
gccgttgtcagtgccgcagagcctcgtcaggtttttgcaagaatggcggcccgtttctac
ggagctcaacccgatacaattgttgccgtcaccggaactgcgggcaagacatccgttgct
catttcgcccgtcagattttccagtctgcaggccatcctgccgcaagtcttggtaccctg
ggcgttatcaagccggatggggaaagctacggcggcctgacaacgccggacccggttgcc
ttgcacaagcagttggcagagctggaagaagaaggtgtcaatcacgcggcgcttgaagcc
tcttcgcacggtctcgatcagtaccggctggacggtgttcggctgacggcggccgccttc
accaatcttggccgcgatcacatggattatcatccgacgatcgagcattacctgaatgca
aaacttcgcctgttcaaagagttgcttccgtcaggcggcacagtggtctgcgatccgggt
gaaaaatatgctgacagggtcatggcggtcgcgcaggagcgaggattgccgctcttcacg
gtcggagaaaccggccggaacctcacccttaccggcctaaagccgatgggggcagggcag
gaactgacgatccagagtgcgcgcggcgaatacaaggtgacgctgcccctgatcggtcgc
ttccaggtttccaacgcactcattgctgccggtctcgcgattgccgcaggcatagacacg
ggaactgccttgcgggcccttgaaaacctgaagggggctccgggccgtcttgaacttgcc
ggcaagacgccagcaggcgggttggtttttgtcgattacgcccacaagccggacgcgctt
gataacgcccttgcggctttgaagccgtttgcccgtggcacgctgtccgtgatcatcggc
gccggtggcgacagggaccccggaaaacgcgagctgatgggggaagtcgcggctcgcagg
gccgatctggttatcgtcacggatgacaatccccgctcggaagacccggcgaccattcgc
aaggcggtgttggttggcgcacccgatgcaatggagattggtgaccggtatgaagcgatc
gcagagggagttcgccgcctaaaggatggcgatatcctgtgtgtggccggaaaaggtcac
gaaacgggccagattgttggcgacacagtgattcccttttccgatcacgaagccgtaaag
cgcgccatcagtcttgaaggaaacacatga
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