Roseibium aggregatum: QUB73_09815
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Entry
QUB73_09815 CDS
T11280
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
ragg Roseibium aggregatum
Pathway
ragg00540
Lipopolysaccharide biosynthesis
ragg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
QUB73_09815 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ragg01005
]
QUB73_09815 (lpxC)
Enzymes [BR:
ragg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
QUB73_09815 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
ragg01005
]
Lipid A
QUB73_09815 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
WJS04549
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All DBs
Position
2147308..2148252
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AA seq
314 aa
AA seq
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MTAYVDRQTTLADQVTLTGIGVHSGKPASITLVPAEAGVGIVFTRTDQENSTEVPALWNK
VSATALCTVLGDPSSEGVATVEHLMAALFGMGVDNLIVEIDGPEMPVMDGSSVAFVEAIE
QIGLKRLDRGRRYLKVKKTVRVDNGTAWCELHPYNGTKFDITIDFDTPLIGRQQFSSDIT
PDVFRDELSRARTFGYVKDVEQLWKMGFALGSSLENSVAIAEDKVLNPEGTRWPDEFARH
KALDAVGDLALAGLPILGLYRSYKGGHKMNHAILVKLFEDPSAFEIVESPAFRKVGQVDK
GGIAAAAAFGPDVS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatatgttgaccgacagacgacgctagccgatcaggtgaccctgaccgggatt
ggcgttcattcgggcaaacccgcgtcgatcactctcgtaccggccgaagctggtgtgggg
attgtgttcacccgcaccgaccaggaaaactccaccgaggttccggccctctggaacaag
gtatccgcaacagcactttgcaccgttctcggcgatccttccagtgaaggtgtcgcgacc
gttgaacatctcatggcagctcttttcggcatgggtgtcgacaacctgatcgtggaaatc
gacggtccggaaatgccggtcatggacggcagcagcgttgcgtttgtcgaagcaatcgag
cagatcggcctgaaacgcctggaccggggacgccggtacctgaaggtgaagaagaccgtt
cgtgtggacaacggtacggcatggtgcgagctgcacccctacaacggcaccaagttcgat
atcaccatcgacttcgacacgccgctgatcggtcgccagcagttctcttccgacatcacc
ccggacgtgttccgtgacgagctttcccgtgcgcgcaccttcggctacgtgaaggatgtc
gagcagctttggaagatgggttttgccctgggatcgtcgctggaaaattccgtggcgatt
gccgaggacaaggttctcaatccggaaggcacccgctggccggacgagtttgcacgtcac
aaggcgctggacgcggttggtgacctggctcttgccggtctgccgatcctgggtctctac
cgctcctacaagggcgggcacaagatgaaccacgcgatcctggtcaagctgtttgaagat
ccgagcgcgttcgaaatcgtcgagtcgcccgcattccgcaaggtcggccaggtcgacaag
ggcggtatcgcagccgctgctgctttcgggcctgacgtctcctga
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