Roseibium aggregatum: QUB73_15030
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Entry
QUB73_15030 CDS
T11280
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ragg Roseibium aggregatum
Pathway
ragg01501
beta-Lactam resistance
ragg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QUB73_15030
01503 Cationic antimicrobial peptide (CAMP) resistance
QUB73_15030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ragg02000
]
QUB73_15030
01504 Antimicrobial resistance genes [BR:
ragg01504
]
QUB73_15030
Transporters [BR:
ragg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
QUB73_15030
Antimicrobial resistance genes [BR:
ragg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QUB73_15030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WJS00494
LinkDB
All DBs
Position
3245750..3248905
Genome browser
AA seq
1051 aa
AA seq
DB search
MFSRFFIYRPKFALVISIVITIAGVLGYLSLPVEQFPNITPPVVNVTATYTGANAEVLEE
TVAAPIEGQVNGVDDMIYMQSTSNDSGNYSLNVTFAVGTDPDIATVNTQNRVSQANSQLP
SDVTNNGVTVQKASTNMLLVITLFSPNGSYDPVFLSNYASINLKDALARVPGVGLADVMT
DFSYGMRIWLDPDRLTSLGMTPTDFITAVRDQNIQVAAGQIGAPPVPDGQQFQYTIKAKG
RLASPEEFEQIVLRTGADGAVVTIGDVARVELGAQVYNASGEYNGKPSTVLAIYQAPGAN
ALQVSENVLARLDELAKNFPPDMQYGVPFNTTDFVQASLNDVITTLFLTFLLVVSVVFIF
LGNWRATIIPTVAIPVSLIGTFAVLLALGMTLNTISLFALVLAIGIVVDDAIVVVENVER
IIADEGLSPKEATTKAMEQITSPVIATTLVLLAVFVPTIFMPGITGRLYSQFAVTISVSV
LISSINALTLSPALCGLILKARSGPPRGIMGLFDRGITSVRNGYTGIIRRLVRFAVIGLA
VVAGAVALIVTLGGSLPQGFLPSEDQGYLMVDVQLPDGASLQRTENVTKQVVDLTSKTPG
VEDVVIVNGYSILNGATSSNAALVIATMKNWEDRQAPDLRIDAILAKFWAEFSTIPGANI
IAFNPPPIPGLGTTGGVQVMLQQTGGGSPQDLSSALGSMIYSANQSAEVGRAYSTFRANV
PQVFIDLDREKAKTLGINVSDVFTTLQAYLGSYYINDFNIFGRVYKVMIQAEGKFRDRVE
DIGALYVRSSDGTMVPMRSILTTQNVLGPQILTRYNMFRAAAVMADPAPGASTGVVINEV
NAAGAEALPDGYSLEWTGTALQQLGSGQIVLFILLLSILFTYLFLVAQYESWTMPIAILM
SVSFAILGALVAVFATGGDVNLYTQIGMIMLVGMGAKNAILIVEFAMEQRADGKSIKDAA
VEAAHLRFRAVMMTALSFLLGVVPLMTASSAGAASQKAIGFAVFGGMLFATCIGILMIPI
LYVNMQTMRESVKSWFGGRGKTQTEQEPVAS
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgttttcacgcttttttatctaccggccgaaattcgcgctggtcatttccattgttatc
actattgccggtgtgcttgggtatctgtcgcttccggttgaacagtttccgaatatcacc
ccgccggtcgtaaacgttacggcgacctataccggcgccaatgccgaagtgctggaagaa
actgttgccgcgccgatcgaagggcaggtcaacggcgtcgacgacatgatctacatgcag
tcgaccagtaacgacagcggcaactattcgctcaacgttaccttcgctgtcggaacagac
ccggacattgccacggtcaacacgcagaaccgggtcagtcaggccaacagccagctgcca
agcgatgtgaccaacaacggtgtgacagtgcaaaaagccagcacgaacatgttgctggtc
attacactgttttcgccaaacggcagttatgatccggtcttcctgtcaaactatgcctcg
atcaacctgaaggatgcacttgcccgtgtgcctggggttggtctggcagacgtcatgacc
gacttttcctacggcatgcggatctggcttgatccggacagattgaccagcctgggcatg
acaccgacggatttcatcaccgccgtacgtgaccagaacattcaggtggctgccggtcag
atcggcgcacctccggttccggacggacagcagttccagtacacgatcaaggcaaagggc
cgtctggcctcaccggaggaatttgagcagatcgttctgcgaaccggtgcagacggcgcg
gtcgtaaccattggcgatgttgcccgcgtcgaacttggcgcacaggtttacaacgcctcc
ggcgaatacaacggcaagccttccacggttctggcaatctatcaggcaccaggtgcaaac
gcgcttcaggtatcggaaaacgtgctggctcgcctggatgaactggccaagaattttccg
ccggatatgcagtacggcgttcccttcaacaccacggatttcgttcaggcttctctcaac
gacgtcatcaccacacttttcctgaccttccttctggtggtctcggtggtgttcatcttc
ctcgggaactggcgagcgacaatcattccgactgttgccattccagtgtcgcttatcggc
acgtttgccgtgctgctggcacttggcatgacgctcaacacgatttcgctgttcgcactg
gtgctggctattggtatcgttgtggatgatgccatcgtcgtcgtggaaaacgtggaacgc
atcattgccgacgaaggcttgtcgccgaaagaagccacgacgaaagcgatggaacagatc
accagtccggtgattgccacgacgttggtgctactggcggtgttcgttccgactatcttc
atgccaggcattaccggccgtctctattcccagttcgctgtcaccatctcggtctctgtg
ttgatttcctcaatcaacgcgctgacgctgtctccggctctctgtggcctgatcctgaaa
gcccgttctggcccgccgcgcggcatcatggggctgttcgaccgtggcatcacctcggta
cgcaacggatataccggtattattcgccgccttgttcgcttcgccgtgatagggcttgcc
gttgttgccggggcggtcgccttgatcgtgacactcggcggatcactgcctcagggcttt
ctgccttcggaagaccagggttacctgatggtcgacgtgcagcttcccgatggagcgtcg
ttgcaacggacggagaacgtcaccaagcaggtggttgacctgacttccaaaacgccgggt
gtggaagacgtcgtcatcgtcaacggctattccatcctgaacggcgcaacgtcctcgaat
gcggcgctggtgattgcgaccatgaagaactgggaagaccgtcaggctcccgaccttcgc
attgacgcgatcctggcaaagttctgggcggaattctcgactattcccggtgcgaatatc
attgccttcaaccccccgccgattccgggccttggcacgaccggcggtgttcaggtgatg
ctgcaacaaaccggtggaggttcgccgcaggacttgtcatcggcacttggctcgatgatt
tattctgccaaccagagtgccgaagttgggcgcgcctactcgactttccgggccaatgtg
cctcaggtctttatcgatcttgatcgtgaaaaggccaaaacactcggcatcaatgtgtcg
gatgtgttcacgacactgcaggcctatctgggctcgtactatatcaacgacttcaacatc
ttcggccgggtctacaaggtgatgatccaggcggaaggcaagttccgcgatcgggtggag
gatatcggtgcactttatgtgcggtcgagcgacggcaccatggtgcccatgcgcagcatt
ctgacgacacagaatgtcctcggtccgcagattctgacccgctacaacatgttccgtgct
gctgccgtgatggctgatccggcaccgggagcctcaacaggtgtggtcatcaacgaagtc
aatgctgcgggggctgaagcccttccggacgggtattctctcgagtggacaggtacagcg
ttgcagcagctcggatcggggcagatcgttcttttcatcctgcttttgtcaatcttgttc
acgtatctcttcctggtcgctcagtatgagagctggacgatgccgattgcgatattgatg
tcggtgtcgtttgcaatcctcggggcgcttgttgcggtctttgcgactgggggggatgtc
aacctctacacacagatcggcatgatcatgcttgtcgggatgggcgccaagaatgccatc
ctcatcgtggagtttgcgatggagcagagggccgatggcaagtcgatcaaggatgcagca
gtagaagcggctcatcttcggttcagggcggtcatgatgacggccttgtcgttcttgctg
ggtgtcgtgcctttgatgaccgcatcaagtgctggtgcggccagtcagaaagccattggc
ttcgcggtgttcggtggcatgctgtttgcgacctgcatcggcattctcatgatcccgatt
ctttatgtgaacatgcagaccatgcgtgaatccgtcaaaagctggtttggcggaagagga
aaaacccagacggaacaggagcctgttgcgtcctga
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