Roseibium aggregatum: QUB73_20435
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Entry
QUB73_20435 CDS
T11280
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ragg Roseibium aggregatum
Pathway
ragg01501
beta-Lactam resistance
ragg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QUB73_20435
01503 Cationic antimicrobial peptide (CAMP) resistance
QUB73_20435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ragg03036
]
QUB73_20435
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ragg02000
]
QUB73_20435
01504 Antimicrobial resistance genes [BR:
ragg01504
]
QUB73_20435
Chromosome and associated proteins [BR:
ragg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
QUB73_20435
Transporters [BR:
ragg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QUB73_20435
Antimicrobial resistance genes [BR:
ragg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QUB73_20435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_RND
YknX_C
BSH_CzcB
BSH_CusB
RND-MFP_C
Biotin_lipoyl
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
WJS01522
LinkDB
All DBs
Position
complement(4467323..4468501)
Genome browser
AA seq
392 aa
AA seq
DB search
MSIWKQLVLTLLVVVVAAGLWVRYYPGAGAHLSAWGIDWLDFAVADAAPSGGDQPRRGRG
GPQGAVVATPVVEITINDRLSAIGTSTALQSVAVTPYTSGRMTEVLVKSGATVKAGDAVA
KLDLDAEQIAVERAANALKDAEARLQRMQVLRKTNTATAVQVTDAELSVDNARLQLREAE
LALSRRSIETPIAGVVGILPITAGNYVSSQTIIATIDDRSEILVDFWVPERFASAIAVGS
PITATSVARPGETFEGVISAVDNRIDIDSRTLQVRARFPNKADKLRAGMSFQVSMKFPGD
KYPAVDPLAVQWGSDGAFVWAVREGKGVRVPVSIIQRNTDSVLVDAELTVNDEVVTEGIH
LVRNGADVTVADRKQAPASDTPATTASSQSGS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaatttggaaacagctcgttctcaccctcctggttgtcgtcgtggcggcggggctc
tgggttcgttattatccgggggccggcgcgcacctgtccgcctgggggatcgactggctg
gattttgccgtcgccgatgcagcgccaagcggaggcgatcaaccacggcgtggccggggt
gggccgcaaggtgccgtcgttgcaacgccggtcgtcgaaatcacgatcaatgaccgtctg
tcggcgatcggtaccagcacggcactgcagtctgttgccgtgacgccttacacaagcggc
cgcatgaccgaggttctggtcaagtccggtgccaccgtgaaggccggagacgccgttgcc
aaactagatctggacgccgagcagatcgccgtcgagagagccgcaaatgctctgaaggat
gccgaggcccggcttcagcgtatgcaggtgctgcggaaaaccaatacggctacggctgtt
caggtgacagacgcggaactctcggtagacaatgcgcggctgcaacttcgcgaagccgaa
ctggcgctctcccgccgctccatcgaaactccgatcgccggcgtggtcggcattcttccc
attaccgcaggcaattacgtttcctcgcagaccatcatcgcaaccattgacgaccgcagc
gaaattctcgtcgacttctgggttccggagcggttcgcctccgctatcgcagtgggatct
ccgatcaccgccacgtcggtcgcccgcccgggtgaaactttcgagggtgtcatcagtgcc
gtcgacaaccgcatcgatatcgacagccgcacacttcaggttcgtgcccgttttccgaac
aaggccgacaagttgagagccggcatgtcgttccaggtctcgatgaagtttcccggcgac
aaatatccggcggttgatccgctggccgtgcaatggggttccgacggtgccttcgtctgg
gccgtgcgtgaaggcaagggcgttcgcgttccggtcagcattatccagcgcaataccgac
agcgtgctggtcgacgcggagttgacggtcaacgacgaggtcgtgaccgaaggcattcac
ctggttcgcaacggggccgacgtgacggttgcagaccgcaagcaggctccggcatcggac
actccggcgacaactgcttccagccaaagcggttcctga
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