Rahnella aceris Y9602: Rahaq_1110 Help Entry Rahaq_1110        CDS       T01422                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism rah  Rahnella aceris Y9602 Pathway rah03030   DNA replication rah03410   Base excision repair rah03420   Nucleotide excision repair rah03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rah00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Rahaq_1110    03410 Base excision repair     Rahaq_1110    03420 Nucleotide excision repair     Rahaq_1110    03430 Mismatch repair     Rahaq_1110  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rah03032]     Rahaq_1110    03400 DNA repair and recombination proteins [BR:rah03400]     Rahaq_1110 Enzymes [BR:rah01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Rahaq_1110 DNA replication proteins [BR:rah03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Rahaq_1110 DNA repair and recombination proteins [BR:rah03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Rahaq_1110    NER (nucleotide excision repair)     GGR (global genome repair) factors      Rahaq_1110    MMR (mismatch excision repair)     DNA ligase      Rahaq_1110   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Rahaq_1110 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 Nlig-Ia DNA_ligase_ZBD PTCB-BRCT HHH 5_3_exonuc RNA_ligase DZR_2 Motif Other DBs NCBI-ProteinID:  ADW72733 UniProt:  A0A0H3F798 LinkDB All DBs Position 1188253..1190274 Genome browser AA seq 673 aa AA seqDB search MATIEEQISQLRTQLRHHEYQYHVLDAPEVPDAEYDRLMRELRELETAHPELVTADSPTQ RVGAAPLSAFEQVRHRVPMLSLDNVFDEESYLAFYKRVQDRLKTAEALTFCCELKLDGLA VSLLYENGELVQAATRGDGTTGENITANVRTIRAIPLRLHGDNIPERLEVRGEVFMPQAG FEAMNDEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGLLEGGELPRSHF ARLQQFKAWGLPVSDRVRLCTGSEEVLAFYRQVEADRPSLGFDIDGVVVKIDSLDIQETL GFVARAPRWATAFKFPAQEQITLVKDVEFQVGRTGAITPVARLEPVLVAGVMVSNATLHN ADEIERLGLRIGDTVIVRRAGDVIPQVVGVVLDERPEDAREVVFPTHCPVCHSDVERVEG EAVARCTAGLICGAQRKEALKHFVSRRALDVDGMGDKIIDQLVEKEYVKTPADLFRLTAG KLTGLDRMGPKSAQNVVRALEKAKETTLARFLYALGIREVGEATAANLAAHYGSVEALKA ADIESLKGVQDVGDVVAKHVVNFLSEEHNQQVIDELLSPEINIHWPEVQVIVPEEIDSPF AGKTVVLTGSLSILSRDDAKDRLTALGAKVSGSVSKKTDLVIAGEAAGSKLAKAQELGIE VIDEAEMIRLLGE NT seq 2022 nt NT seq  +upstreamnt  +downstreamnt atggccactatcgaagaacaaatcagtcaattacgcactcagttgcgccatcacgaatat cagtatcacgttctggatgcaccggaagtgccagatgccgagtatgaccgcttaatgcgc gaattgcgcgagctggaaaccgcgcatcctgagctggtcaccgcggattccccgacgcag cgcgtgggggcggcaccgctttctgcatttgaacaggtcaggcatcgggtaccgatgtta tcgctggacaacgtatttgatgaagaaagctatctggcattttataaacgcgtgcaggat cgcctgaaaaccgctgaagcactgacgttctgctgcgagctgaaacttgatggtctggcg gtgagcctgttgtatgaaaatggcgaactggtgcaggctgccacgcgtggcgatggcacg accggcgagaacatcaccgcgaacgtacgcaccatccgcgcgatccctctgcgtctgcat ggcgacaacattcctgagcgccttgaagtgcgtggtgaggtgtttatgccacaagcgggc tttgaagcgatgaacgacgaagcgcgtcgtacgggagggaaagtgttcgctaacccgcgt aatgccgccgccggttcgttacgtcagctcgatccgcgtatcaccgccaaacgtccgctg accttcttctgctacggcgttggcctgctggaagggggtgaactgccgcgcagccacttc gcccgcctgcaacagtttaaagcctggggtttaccggtcagtgatcgcgtccgcctgtgt accggcagcgaagaagtgctggcgttttaccgtcaggttgaagccgaccgtccgtcactg ggctttgatattgacggcgtggtagtgaaaattgactcgctggatattcaggaaacgctg ggctttgtggcacgtgcgccgcgctgggcaacagccttcaaattcccggcgcaggaacaa atcacgctggtgaaagacgtcgagtttcaggtagggcgtactggtgcgatcacgccggtc gcacgtctggagccggttctggttgcgggcgtgatggtcagcaatgccacgctgcataac gcagatgaaatcgaacgtcttgggctgcgtatcggcgataccgtgattgtccgtcgtgcc ggagatgttatcccgcaggtggtgggcgtggtgctggatgagcgtcctgaagatgcccgc gaagtggttttcccgacgcattgcccggtctgtcattctgatgttgaacgtgtcgaaggc gaagccgtggcgcgttgtacggcgggtctgatttgtggtgcacagcgtaaagaagcgctg aagcatttcgtctcccgccgggcgctggacgttgacggcatgggcgacaaaatcatcgat cagttggtcgagaaagaatatgtcaaaacgccggcagatctgttccgtctgacggcgggc aaacttaccggtctggaccgcatgggaccgaaatcggcgcagaacgtggtccgtgcgctg gaaaaagccaaagaaaccacgctggcgagattcctgtatgcgctgggcattcgtgaagtg ggcgaagccacggcggctaaccttgccgcgcattacggctcggttgaggcgcttaaagcg gcagatattgaatcgctgaaaggcgttcaggatgtgggtgatgtagtggcgaaacacgtg gtgaatttcctgtcggaagaacataaccagcaggtcatcgacgagttgttaagccctgaa atcaatattcactggccggaagtgcaggtcattgtaccggaagaaatcgacagtccgttt gccggcaaaactgtggtgctgaccggttcgctgtcgattctttcccgcgatgacgccaaa gaccgtctgactgcgctgggcgcgaaagtctccggcagcgtgtcgaagaaaaccgatctg gtgattgccggtgaagcggcgggttccaagctggcgaaagcgcaggaactgggcattgag gtgatcgacgaggcggaaatgatccgtctgctgggtgaataa

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