Rahnella aceris Y9602: Rahaq_4686
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Entry
Rahaq_4686 CDS
T01422
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
rah
Rahnella aceris Y9602
Pathway
rah00470
D-Amino acid metabolism
rah00552
Teichoic acid biosynthesis
rah01100
Metabolic pathways
rah01503
Cationic antimicrobial peptide (CAMP) resistance
rah02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rah00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rahaq_4686
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
Rahaq_4686
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rahaq_4686
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Rahaq_4686
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rah01504
]
Rahaq_4686
Enzymes [BR:
rah01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
Rahaq_4686
Antimicrobial resistance genes [BR:
rah01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
Rahaq_4686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ADW76266
UniProt:
A0A0H3FIX5
LinkDB
All DBs
Position
pRAHAQ01:245806..247320
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AA seq
504 aa
AA seq
DB search
MFLSQIRPLFDRLRNCDDAIALINQQGTYSFAELGARTAAIAHFLTPLAGRNVLIYGHKQ
LDAVAAILACISKGCCFTFVDQANPPSRIEKIARMTRTEVIITTLPHPLAGLEQWPQCVS
ASLADISPATLPAEPSLTQSLFYILSTSGSTGEPKGVMISYDNFAAFSAWFAPQVTGGTD
KGCHINHACFSFDMAILDLIPVLSRGQTVLMLDHCNNVLPRQNIRLMTREPDVAVTSWFS
TPSFAELMLKDALFSHVKFPALKRFYIGGERVAPGLITQLQTRFPSLEVMHAYGPTETTC
VTHTHLLSQPLHHQAGLLPLGKPQGLNRIRIVDAAGHPVSATTVGEVRLYGPQVSQGYLP
EDHPRNQAFAEDEWGRYYATGDRGFVDENQSLFICGRDDGQFKLHGNRIELAEVESAVCR
NANVIQCCLVPLEEQGKVTDLQLFVQLHDDNALQRQALRHFLSGQLPGYMIPKQLVFCQH
FPLTLHGKIDRQELVRQYAVSDSF
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtttttatcgcaaatcagaccgctgtttgaccggcttcgcaactgtgatgacgccatc
gcgctgattaaccagcaaggcacctacagttttgctgaactgggcgcacggacggccgcc
atcgcccattttcttacccctctggcgggtcgcaatgtgctgatctacggtcataaacaa
ctcgatgcggtcgccgctattctggcctgcatcagtaaaggctgttgttttacctttgtg
gatcaggcaaatccgccgtccagaattgaaaaaatagcccggatgacgcgcacggaagtg
atcatcaccaccctgccgcaccccctcgccgggctggagcaatggccgcagtgtgtcagt
gcttcactggcagacatttctcctgcaacgctgcccgctgaaccatcattaacccaatct
cttttctatatcctttccacctcgggcagcaccggtgagcctaaaggcgttatgatcagt
tatgacaattttgccgctttcagcgcgtggttcgcaccgcaagtcaccggcggaacggac
aagggctgccatattaatcacgcctgtttttcttttgatatggcgatcctcgatctcatt
ccggttctcagccgcgggcagaccgtgctgatgctggatcattgcaataatgttttgccc
cggcaaaacatcaggctgatgacaagagagccagatgtggccgtcaccagttggttttca
acacccagttttgctgaactcatgcttaaagacgcgctgttcagccacgttaagttcccc
gccctgaagcgtttttatatcggcggtgaacgggttgcgccaggtttgatcacacagtta
cagacgcgttttccgtcgcttgaagtgatgcacgcttatggcccgaccgagacaacctgc
gtgacgcatacgcatcttttgtcccagccgctacaccatcaggcggggttattgccgctg
ggcaagccgcaagggctgaaccgcattcgcatcgtcgatgcggccggtcatccggtttct
gccacaacggtaggtgaagtcaggctttacggccctcaggtttcacagggctatctgccg
gaggatcacccccgcaatcaggcttttgctgaggatgaatggggtcgctattacgccacg
ggcgatcgcggttttgtcgacgaaaatcagtcactgtttatttgcggcagagatgacgga
cagtttaagttgcatggcaatcgcattgagctggcagaagtagaatccgccgtgtgccga
aatgccaacgtgatccagtgctgtctggtaccgctcgaagaacagggaaaagtgaccgac
ctgcaactgtttgtacaactgcatgatgacaatgcgctgcagcggcaagccttacgccat
ttcttgtccgggcagctaccgggatacatgatccctaaacaactggtcttttgccaacac
ttccccctgacattgcatggcaaaatagaccggcaggaactcgtccggcaatacgcggtt
tctgacagtttttaa
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