Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_0871
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Entry
RA0C_0871 CDS
T02107
Name
(GenBank) radical sam domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai00790
Folate biosynthesis
rai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
RA0C_0871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rai03016
]
RA0C_0871
Enzymes [BR:
rai01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
RA0C_0871
Transfer RNA biogenesis [BR:
rai03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RA0C_0871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
DUF6860
Motif
Other DBs
NCBI-ProteinID:
AFD55810
UniProt:
H8M9L8
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All DBs
Position
848662..849294
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AA seq
210 aa
AA seq
DB search
MMTNTEKELLKLGKLLPVMEHFYTIQGEGAYTGKAAYFIRLGGCDVGCHWCDVKESWDPN
LHPLMDAEEVAQIAANHSKTIVLTGGEPLMWNLEILTKKLKDLGCTIHIETSGAYEISGH
IDWVCLSPKKTGLPKESIYAKANELKVIIFNNHDFKFAEEQASKVSQNCKFYLQSEWSKR
DEMYPKITDYILENPKWQASVQTHKYLNIP
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgatgactaatactgaaaaagaattactaaagttagggaaactactccctgtaatggag
catttctatacgatacaaggtgaaggtgcatatactggcaaagcggcatattttattcgt
ttaggaggttgcgatgttggttgtcattggtgcgatgttaaagaaagttgggatcctaac
ttgcaccctttaatggacgcagaagaagttgcccaaatagcagcaaaccattctaagacc
attgttttgacaggtggagagccacttatgtggaatttagaaatacttaccaaaaaatta
aaagacttaggttgcactatacacatagagacttctggtgcttatgaaatatctgggcat
atagattgggtgtgcctttctcctaagaaaacaggtctgcctaaagaaagtatatatgca
aaggcaaatgagttaaaagtaattattttcaacaatcacgattttaagtttgccgaagaa
caagcctctaaagtatctcaaaattgtaaattttatctccaaagcgaatggagtaaaaga
gatgaaatgtatcctaaaataaccgattatattttagaaaatcctaaatggcaggcttcg
gtacaaacacacaaatatcttaatatcccatag
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