Rhodococcus antarcticus: RHODO2019_09835
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Entry
RHODO2019_09835 CDS
T09186
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant00300
Lysine biosynthesis
rant00550
Peptidoglycan biosynthesis
rant01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RHODO2019_09835
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RHODO2019_09835
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rant01011
]
RHODO2019_09835
Enzymes [BR:
rant01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RHODO2019_09835
Peptidoglycan biosynthesis and degradation proteins [BR:
rant01011
]
Precursor biosynthesis
Amino acid ligase
RHODO2019_09835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF4402
Motif
Other DBs
NCBI-ProteinID:
UZJ26611
UniProt:
A0ABY6P4N0
LinkDB
All DBs
Position
complement(2056682..2058187)
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AA seq
501 aa
AA seq
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MVELATLVDAELAGADEALLVTGVTLRAQDARPGDLFAALPGARAHGADFAAAALAAGAV
AVLTDPEGATRPGLDGVPLLVHPAPRAVLGELAAHVYGRPSQRLQVLGITGTSGKTTTAY
LVEAGLRSGGRTPGLIGTVETRVDGRALPSAFTTPEAPDLQALLALMLEQGVDSVVMEVS
SHALELGRADGTRFAVGAFTNLSHEHLDFHPGMEAYFAAKARLFDPASPVATPCAVVCTD
DVWGVRMARLAGPGTVTVSTSGAAASWTTGPVTVAPSGAQAFALHGPDGVTVTAELRLPG
AYNVANAALAVAVLAAAGVGPGDAVRGIAGVDVPGRMERVDRGQPFVAVVDYAHKPAALQ
AVIDALRAQGSGRLAVVVGAGGDRDTTKRCLMGDVAARGADLLVVTDDNPRTEDPATIRA
EVLGGALAVPADLRGEVRESDDRAAAIAAAVAWARAGDVVLVAGKGHETGQEVHGVKHPF
DDRAELARAIGAHPTTSGARA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
ctggtcgagctggccaccctcgtcgacgccgagctggcgggcgccgacgaggccctgctc
gtcaccggagtcaccctccgcgcccaggacgcccgccccggcgacctgttcgcggccctg
cccggtgcccgtgcccacggcgcggacttcgcggccgccgcgctggccgccggcgccgtg
gccgtgctcaccgacccggagggcgccacccgccccgggctcgacggcgtcccgctgctc
gtgcacccggcgccgcgcgccgtgctcggcgagctcgcggcccacgtctacggccggccg
tcccagcgcctgcaggtgctcgggatcaccggtacctccggcaagaccacgaccgcctac
ctcgtggaggccggtctgcggtccggcgggcggacccccgggctcatcggcaccgtggag
acgagggtggacggccgggccctgcccagtgccttcaccacgcccgaggcgccggacctg
caggccctgctcgccctcatgctcgagcagggggtggactcggtggtcatggaggtctcc
agccacgccctcgagctcggccgcgccgacggcacccggttcgccgtcggggcgttcacc
aacctctcccacgagcacctcgacttccacccgggcatggaggcctacttcgcggccaag
gcccggctgttcgacccggcctcgccggtggccactccctgcgccgtcgtctgcaccgac
gacgtgtggggcgtgcggatggcccggctcgccggtccgggcaccgtgaccgtgtccacc
tccggtgctgcggccagctggaccaccggcccggtgaccgtcgcccccagcggggcccag
gcgttcgcgctgcacggcccggacggcgtgacggtcacggccgagctccggctgcccggc
gcctacaacgtggccaacgccgcgctcgccgtggccgtgctggccgcagccggggtcgga
cccggcgacgccgtccgcgggatcgccggggtggacgtgcccggacggatggagcgggtg
gaccgcgggcagcccttcgtggccgtcgtggactacgcccacaagcccgccgcgctgcag
gccgtcatcgacgcgctccgcgcccagggctccggccgtctcgccgtggtggtgggggcg
ggcggtgaccgcgacaccaccaagcggtgcctcatgggcgacgtggccgcgcgcggggcc
gacctgctcgtggtcaccgacgacaacccgcgcaccgaggaccccgccaccatccgtgcg
gaggtgctcggcggtgccctcgcggtgccggccgacctccgcggcgaggtccgcgagagc
gacgaccgggcggcggccatcgccgcggccgtggcgtgggccagggcgggcgacgtcgtc
ctcgtggcgggcaagggacacgagaccggccaggaggtccacggcgtgaagcacccgttc
gacgacagggcggagctcgcccgagcgatcggcgcgcaccccaccaccagcggagcacgc
gcgtga
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