Raoultella sp. X13: DSD31_18820
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Entry
DSD31_18820 CDS
T05540
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rao
Raoultella sp. X13
Pathway
rao01501
beta-Lactam resistance
rao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSD31_18820
01503 Cationic antimicrobial peptide (CAMP) resistance
DSD31_18820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rao03036
]
DSD31_18820
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rao02000
]
DSD31_18820
01504 Antimicrobial resistance genes [BR:
rao01504
]
DSD31_18820
Chromosome and associated proteins [BR:
rao03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DSD31_18820
Transporters [BR:
rao02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DSD31_18820
Antimicrobial resistance genes [BR:
rao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DSD31_18820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
HH_MFP_RND
YknX_C
Beta-barrel_RND
HH_YBHG
BSH_CzcB
HH_EMRA
BSH_YhbJ
Beta-barrel_RND_2
CzcB_C
HH_CzcB
DUF6627
Motif
Other DBs
NCBI-ProteinID:
AXC31371
LinkDB
All DBs
Position
complement(3954796..3955875)
Genome browser
AA seq
359 aa
AA seq
DB search
MRNILRLVCLTLGLAGYALTATAAPAIPVRATVVQLLPHVAERPLPGRIEAIHDVEIRAR
TEGTIVQRHFQDGQYVREGDRLFTLDDAQPRAALALAGAELKSAQASLRQAQQLLTRYQQ
LKNNHSISRNDVDNARMQRDVAAAAVEQAKARVTTQQITLDYTRIDSPVSGRIGHSRFHV
GSLVGPTSGMLVDIVQLDPIRVSFALDEAAFYSKAGQHADIGALKQAWLAQIEPDGRRED
GVLTSVDNRIDTRTASVVLRAEFANPQHRLLPGGNVPVILRPRQAQESLMIPVAAVQQDA
QGFYSWVVTDHNTVALRRLTSGGQQGQQFVVADGLQAGERVVTDGAQRLRDGAAVQLLK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatattttgcgcctggtctgcctgacccttggcctggccggttacgccctgacg
gccaccgccgcgcccgccatcccggttcgcgcgaccgtcgttcaactgctgccgcatgtg
gctgaacgtccgcttcccggccgcattgaagcgattcatgacgtggagatccgcgcacgc
acggaggggaccattgtgcagcgccacttccaggacgggcagtacgtcagggaaggcgat
cggctgttcaccctcgatgatgcccaacctcgggctgcgctggcgctggccggggccgag
ctgaaaagcgcgcaggcttcgctgcgtcaggcccagcagctgctgacccgctatcaacag
ctgaaaaacaatcactccatcagccgcaacgatgtcgataacgcccggatgcagcgcgat
gtcgccgccgccgccgtggaacaggcgaaggcgcgcgtcaccacgcagcaaattacgctg
gattatacgcgcatcgactcgccggtcagcgggcgtattggccacagtcgttttcatgtc
ggcagcctggtggggccgaccagcggcatgctggtggatatcgtccagctcgacccgatt
cgcgtctctttcgccttagatgaagccgccttttacagtaaagccgggcagcatgccgat
atcggcgcgctgaagcaggcgtggctggcgcagattgaacccgacggcaggcgggaagat
ggggtgttgacctcggtcgataaccggattgatacccgcaccgccagcgtcgtgctgcgc
gccgaattcgccaatccgcagcatcgcctgctgccgggcggcaacgtgccggtcattctt
cgcccgcgacaggcgcaggagagtttgatgatcccggttgccgccgtccagcaggatgcg
caggggttttatagctgggtggtgacggaccataacaccgttgcgctgcgccgtttaaca
tcgggcggccagcaggggcagcagtttgtcgtggcggacggtctgcaagcgggcgagcgc
gtggtgacggacggcgcgcagcgtctgcgtgacggcgccgccgttcagttgctgaaataa
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