Rhodovastum atsumiense: RHOA_0896
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Entry
RHOA_0896 CDS
T08162
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00540
Lipopolysaccharide biosynthesis
rap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RHOA_0896 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rap01005
]
RHOA_0896 (lpxC)
Enzymes [BR:
rap01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
RHOA_0896 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
rap01005
]
Lipid A
RHOA_0896 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
CAH2599492
LinkDB
All DBs
Position
RHOA:965251..966240
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AA seq
329 aa
AA seq
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MDGLPQTFRLETAAFGAAPRLAGLGFGMQRTLRNAISCVGVGLHSGRKVSLSLRPAPADT
GIVVRRTDLGIDIPARWDNVVDTRLCTVLGLPGQPAHRVGTVEHVLAALAGCGVHNAVLE
VDAPEMPILDGSAAAFVFLIDCAGIVEQDQPLRAIEVLRPVRVSQGDAYAELRPGVHGFD
IAGSIAFEAEAIGRQALTLRLSETSFRTDLARARTFALAAEIDSLRAAGLARGGSLDNAV
VVDGAQVLNPAGLRMQDEFVRHKLLDVVGDLSLAGAPLRARLLAHRPGHALNNRLLHALF
ADAANWRFAPQPEPLASWHAGLPAAAAPV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggatgggctgccgcagacatttcgcctggagaccgccgccttcggcgccgcgccgcgc
ctggcgggactcggcttcggcatgcagcgcacgctccgcaatgccatctcctgcgtcggc
gtcgggctgcattccggccgcaaggtatcgctctctttgcgccccgcgcccgccgatacc
ggcatcgtggtgcgccgcaccgacctcggcatcgacatcccggcgcgctgggacaacgtc
gtcgacacccgcctgtgcaccgtgctcggcctgccgggccagccggcgcaccgggtcggc
acggtcgagcatgtgctggccgcgctcgccgggtgcggcgtgcataacgccgtgctggaa
gtcgatgcgccggagatgcccatcctcgacggctcggcggcggccttcgtgttcctgatc
gactgcgccggcatcgtcgaacaggaccagccgctgcgggcgatcgaggtgctgcggccg
gtgcgggtcagccagggcgacgcctacgccgaattgcgcccgggcgtgcatgggttcgac
atcgccggctccatcgccttcgaggccgaggcgatcgggcgacaggcgctgaccctgcgc
ctgtccgagaccagcttccgcaccgacctggcacgggcgcgcaccttcgccctggccgcc
gaaatcgacagcctgcgggccgccggcctcgcgcgcggcggcagcctcgacaacgccgtg
gtggtggacggcgcccaggtgctgaacccggccggcctgcgcatgcaggacgaattcgtc
cgccacaagctgctcgacgtggtcggcgacctgtcgctggccggcgcgccgctgcgcgcg
cgcctgctggcgcaccgccccggccatgcgctgaacaaccgcctgctgcacgcgttgttc
gccgatgccgccaactggcgcttcgccccgcagcctgagccgctcgcgagctggcacgcc
ggcctccccgccgcggcggcgccggtctga
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