Rhodovastum atsumiense: RHOA_1103
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Entry
RHOA_1103 CDS
T08162
Name
(GenBank) NAD(P)-binding protein
KO
K15022
formate dehydrogenase (NADP+) beta subunit [EC:
1.17.1.10
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00680
Methane metabolism
rap00720
Other carbon fixation pathways
rap01100
Metabolic pathways
rap01120
Microbial metabolism in diverse environments
rap01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
RHOA_1103
00680 Methane metabolism
RHOA_1103
Enzymes [BR:
rap01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.10 formate dehydrogenase (NADP+)
RHOA_1103
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer4_20
NADH_4Fe-4S
Pyr_redox_3
Pyr_redox
NAD_binding_8
DAO
FAD_oxidored
NAD_binding_7
AlaDh_PNT_C
HI0933_like
Amino_oxidase
Thi4
FAD_binding_2
FAD_binding_3
GIDA
MurD-like_N
DUF5999
3HCDH_N
NAD_binding_9
Fer4_9
TNFR_c6
Motif
Other DBs
NCBI-ProteinID:
CAH2599699
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All DBs
Position
RHOA:complement(1178894..1180891)
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AA seq
665 aa
AA seq
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MARVHYGVWNGVVHDHRQGGTPETGDLAELRDFDAFNEGNAIRAFLGDRGFFVFDPHVSL
IDALWRYMDKAAEQSCGKCTPCRMGTQLVRDALDGMRRGVPGGLGLDDITALAAQMDTTS
LCGLGQTCAKALLAALAHFRDQIEAEIAAAPLPDQYGMTYMTAPCIEACPSKVNVPRYID
YIRDGKPAHSLGVILQKYPMAATCGRVCVRFCEMACRRNLVDEAVGIKTLKRYVADQQQG
ANALMFTRDMIAEPLGPDMRVAVIGAGPAGISCAYHLLLHGYHVDILEAMDEAGGMAAIG
IPSYRLPKDVLHKETDIITALGGHLLFGQALGRDFSIDELFERGYRAVFLSIGCQQGSVL
GVEGEDPEMLGYETGIGFLLKVHDHVAGLQPMPLSGEVVVVGGGNVAMDCVRSALRMGAE
KVHLVYRRTREDMPADREEIEAAEAEGVIFHYLTNPTRVLAENGRVAGIELTGMRQGEPD
AKGRRNVVAVPDSGWTLRCNTLIAAIGQQVSQTSLRPEDGIAFDRWNCVKVNSSSLATSR
PGVFAGGDCASGPSTLVHAMSNGLKAARNIDDWIRLGHVRFAPRSRMRHLLADHHLLAVD
SVEFPVKHLYRVHHPELDPELRRQMFEEVEQTISQADAYREAKRCLRCYRIYSVITDLPI
PEGAA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagtccattacggcgtctggaatggtgtggtccatgaccaccgacagggcgga
acaccggaaaccggcgaccttgccgaactgcgcgatttcgatgccttcaatgaaggcaac
gccattcgcgccttcctcggcgatcgcgggttcttcgtcttcgatccccatgtcagcctg
atcgatgcgctgtggcgctacatggacaaggccgcagagcagtcctgcggcaagtgcacg
ccctgccgcatgggcacgcaacttgtgcgcgatgcgctcgacggcatgcgccgcggcgtg
ccgggtggcctcggcctggacgacatcactgccctggcggcgcagatggacaccacctcg
ctctgcggcctgggccagacctgcgccaaggccctgctggcggcgctcgcgcatttccgc
gaccagatcgaggcggaaatcgccgcggcgccgctgcccgaccagtacggcatgacctac
atgaccgcgccctgcatcgaggcctgcccgtccaaggtcaacgtgccgcgctacatcgac
tacatccgcgacggcaagccggcgcattcgctcggcgtgatcctgcagaaatacccgatg
gccgccacctgcggtcgggtctgcgtgcgcttctgcgagatggcgtgccggcgcaacctg
gtggacgaggcggtcggcatcaagacgctcaagcgctatgtcgccgaccagcagcagggc
gcgaacgcgctgatgttcacccgcgacatgatcgccgagccgctcggcccggacatgcgg
gtcgccgtgatcggcgccgggccggccggcatttcctgcgcctatcacctgctgctgcac
ggctatcacgtggatatcctggaggcgatggacgaggccggcggcatggccgcgatcggc
atccccagctaccgcctgcccaaggacgtgctgcacaaggaaaccgacatcatcactgcc
ctcggcgggcacctgctgttcggccaggcgctgggccgcgatttctcgatcgacgagctg
ttcgagcgcggttaccgcgcggtgttcctttccatcggctgccagcagggctcggtgctg
ggcgtcgagggcgaggacccggagatgctgggctacgagaccggcatcggcttcctgctg
aaggtgcacgaccacgttgccgggctgcagcccatgccgctgtccggggaggtcgtggtg
gtcggcggcggcaacgtcgccatggactgcgtgcgctccgccctgcgcatgggggcggag
aaggtgcatctggtctatcgccgcacccgcgaggacatgcccgccgaccgcgaggaaatc
gaggccgccgaggccgagggcgtgatcttccactacctgaccaacccgacgcgcgtcctg
gccgaaaacggccgggtcgccggcatcgagctgaccgggatgcgccagggcgagcccgac
gcgaagggccggcgcaatgtggtggcggtgccggacagtggctggacgctccgctgcaac
accctgatcgcggccatcggccagcaggtgagccagacctcgctgcggcccgaggacggc
atcgcgttcgaccgctggaactgcgtgaaggtcaattcctcctcgctcgccacctcccgt
cccggtgtgttcgcggggggggactgcgcgtccggcccgtcgacgctggtgcatgccatg
tccaacgggctgaaggctgcgcgcaacatcgacgactggatccggctcggccatgtccgc
ttcgcgccgcgctcgcgcatgcgccacctgctggccgaccaccacctgctcgccgtcgac
agcgtcgagttcccggtcaagcacctctaccgggtgcaccaccccgaactcgatcccgag
ctgcggcgccagatgttcgaggaggtcgagcagaccatcagccaggccgacgcctatcgc
gaggcgaagcgctgcctgcgctgctatcgcatctattccgtcatcaccgacctgccgatt
cccgaaggagcggcgtga
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