Rhodovastum atsumiense: RHOA_1887
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Entry
RHOA_1887 CDS
T08162
Symbol
mdh
Name
(GenBank) Malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00020
Citrate cycle (TCA cycle)
rap00270
Cysteine and methionine metabolism
rap00620
Pyruvate metabolism
rap00630
Glyoxylate and dicarboxylate metabolism
rap00680
Methane metabolism
rap00710
Carbon fixation by Calvin cycle
rap00720
Other carbon fixation pathways
rap01100
Metabolic pathways
rap01110
Biosynthesis of secondary metabolites
rap01120
Microbial metabolism in diverse environments
rap01200
Carbon metabolism
Module
rap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rap_M00012
Glyoxylate cycle
rap_M00168
CAM (Crassulacean acid metabolism), dark
rap_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RHOA_1887 (mdh)
00620 Pyruvate metabolism
RHOA_1887 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
RHOA_1887 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RHOA_1887 (mdh)
00720 Other carbon fixation pathways
RHOA_1887 (mdh)
00680 Methane metabolism
RHOA_1887 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RHOA_1887 (mdh)
Enzymes [BR:
rap01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
RHOA_1887 (mdh)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
DUF357
Motif
Other DBs
NCBI-ProteinID:
CAH2600485
LinkDB
All DBs
Position
RHOA:complement(1953929..1954882)
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AA seq
317 aa
AA seq
DB search
MARKKIALVGAGNIGGTLAHLIGLKELGDVVLFDVFGGVAAGKALDIAQSAPVDGFDARL
SGGSDYAAIAGADVVIVTAGFPRLPGMSRDDLLTKNAGVIGQVAEGIKTYAPNAFVICIT
NPLDVMVWVLQQRSGLPANKVVGMAGVLDSARFRHFLAEEFGVSVEDVTAFVLGGHGDTM
VPLTRYSTVAGIPVPDLVKMGWTTQERIDAIVKRTANGGGEIVKLLEKGSAFYAPATSAI
AMAEAYLKDKKRVLPSAVYLNGEYGQKDLYVGVPVVIGEGGVERIVEVQFTPEEKAAFEK
SCGAVRDLIEAFKKLGV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagaagattgccctggtcggcgccggcaatattggtggaacgctcgcccat
ttgatcggcctcaaggaactcggcgacgtcgtgctgttcgacgtgttcggcggcgtggcc
gcgggcaaggcgctggatatcgcccagtccgccccggtggacggcttcgacgcccggctg
agcggcgggtcggattatgccgcgatcgccggggccgacgtggtcatcgtgaccgccggc
ttcccccgcctgcccggcatgagccgcgacgacctgctgaccaagaatgccggggtgatc
ggccaggtcgccgagggcatcaagacctatgccccgaacgccttcgtcatctgcatcacc
aacccgctcgacgtgatggtgtgggtgctacagcagcgctcgggcctgccggcgaacaag
gtggtgggcatggccggcgtgctggattccgcccgcttccgccacttcctcgccgaggag
ttcggggtctccgtggaagacgtgaccgccttcgtgctgggcgggcatggcgataccatg
gtaccgctgacccgctactcgacggtggccggcatcccggtgcccgacctggtgaagatg
ggctggaccacccaggagcggatcgacgccatcgtcaagcgcaccgccaatggcggcggc
gagatcgtgaagctgctggagaagggaagcgccttctatgcccccgcgaccagcgccatc
gccatggccgaagcctatctgaaggacaagaagcgggtgctgcccagcgcggtctacctg
aacggcgagtacggccagaaggacctgtatgtcggcgtgcccgtggtgatcggcgagggc
ggcgtcgagcgcatcgtcgaggtgcagttcacgccggaggagaaggccgccttcgaaaag
tcctgcggcgccgtgcgcgacctgatcgaggccttcaagaagctgggcgtctga
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integrated database retrieval system