Rhodovastum atsumiense: RHOA_5506
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Entry
RHOA_5506 CDS
T08162
Name
(GenBank) Efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rap
Rhodovastum atsumiense
Pathway
rap01501
beta-Lactam resistance
rap01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RHOA_5506
01503 Cationic antimicrobial peptide (CAMP) resistance
RHOA_5506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rap03036
]
RHOA_5506
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_5506
01504 Antimicrobial resistance genes [BR:
rap01504
]
RHOA_5506
Chromosome and associated proteins [BR:
rap03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RHOA_5506
Transporters [BR:
rap02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RHOA_5506
Antimicrobial resistance genes [BR:
rap01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RHOA_5506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
CAH2604264
LinkDB
All DBs
Position
RHOA:complement(5656767..5657954)
Genome browser
AA seq
395 aa
AA seq
DB search
MAVRLLVVVLAFAVGCAMPARAQMGPPGPPAVGVITAERKPITETNEFVGRIQATDRVDI
VARVTAFLQERLFTEGVEVQKGDLLYRLERPPFEADLQAKLATVAQMQALLRNATITLNR
AQTLLNTPAGQRSQVDDALAQQASYAAQLQGAQAQARSSQINLDYTEIHAPIAGKIGRTT
VTTGNVVGPTTGVLTTIVSQDPMYVLFPIAVRTGLDLRNRYADKGGFAAVKIRVRLPDGV
TYPLDGQLDYVDPTVAQGTDTIMLRGRVPNPLRPGAKQGEPGNRQLVDGMFVTVLLEGVE
PVLALAIPRSAVLSDQQGNFVYVVDKDNKAQQRRIQLGQSTPDTAVVMAGLQPGEQVITD
GIQRVRPGVVVNPGPAAAAPKAPPSGSPASSPARN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggccgtacgcctgctcgttgtcgtcctggcattcgccgtgggctgtgccatgcctgcc
cgggcccagatggggccacccggaccacccgccgtcggcgtgatcacggcggagcggaaa
ccgattacggagaccaatgagttcgtcggccgcatccaggccaccgatcgcgtcgacatc
gtcgcccgcgtgaccgcgttcctgcaggaacggctgttcaccgaaggggtggaagtgcag
aagggcgacctgctgtaccggctggagcgtccgcccttcgaggccgacctgcaggccaag
ctggcgacggtcgcgcagatgcaggcgctgctgcgcaacgccaccatcaccctcaaccgc
gcgcagacgctgctcaacacccctgccggccagcgcagccaggtggacgacgcgctggcg
cagcaggccagctacgccgcacagttgcagggcgctcaggcacaggcacggtcctcgcag
atcaacctcgactacaccgagatccacgccccgatcgccggcaagatcggccgcaccacc
gtcaccaccggcaacgtggtcgggcccaccaccggggtgctgaccaccatcgtcagccag
gacccgatgtacgtgctgttcccgatcgcggtgcgcaccggtctcgacctgcgtaaccgc
tatgccgacaagggcgggttcgccgccgtcaagatccgggtgcggctgccggacggcgtg
acctacccgctggacggccagctcgactatgtcgatcccacggtcgcccagggcaccgac
accatcatgctgcgtggccgcgttcccaacccgctgcgcccgggggcgaagcaaggcgag
cccggcaaccgccaactggtcgatggcatgttcgtgaccgtgctgctggaaggggtggag
ccggtgctggcactcgccatcccgcggtctgcggtgctgtccgaccagcagggcaacttc
gtttacgtggtcgacaaggacaacaaggcgcagcagcgccgcatccagctcggccagtcg
accccggacaccgccgtggtgatggcggggctacagccgggcgaacaggtgatcaccgac
ggcatccagcgcgtgcggccgggcgtcgtggtcaatcccggcccggcggccgccgcgccg
aaagcacccccgtcaggctcccccgcttcctcgccggcccggaactga
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