Rhodovastum atsumiense: RHOA_5783
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Entry
RHOA_5783 CDS
T08162
Symbol
mcl
Name
(GenBank) Malyl-CoA/beta-methylmalyl-CoA/citramalyl-CoA lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00630
Glyoxylate and dicarboxylate metabolism
rap00660
C5-Branched dibasic acid metabolism
rap00680
Methane metabolism
rap00720
Other carbon fixation pathways
rap01100
Metabolic pathways
rap01120
Microbial metabolism in diverse environments
rap01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RHOA_5783 (mcl)
00660 C5-Branched dibasic acid metabolism
RHOA_5783 (mcl)
09102 Energy metabolism
00720 Other carbon fixation pathways
RHOA_5783 (mcl)
00680 Methane metabolism
RHOA_5783 (mcl)
Enzymes [BR:
rap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
RHOA_5783 (mcl)
4.1.3.25 (S)-citramalyl-CoA lyase
RHOA_5783 (mcl)
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Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
CAH2604579
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Position
RHOA:complement(5957722..5958768)
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AA seq
348 aa
AA seq
DB search
MKLPGDFYRPLAIGAPTPLRELPVVPERMLHFFPPHLAKVRAKVPELVGKVDVLVGNLED
AIPADAKEAARTGFIELAEAVDFRETRLWTRVNALNSPWVLDDLLQVVGRVGHKLDVVML
PKVEGPWDIHYLDQLLAQLEARHRIGRPILIHALLETALGVRNVNEIAAASPRMHGMSLG
PADLAASRGMKTTRIGGGHPSYGVLADATADGAPRAFVQQDLWHATVVRMVDACRASQLR
PFYGPFGDFEDPAACEAQFRNAFLLGCVGAWTLHPSQIAIARRVFSPEPAEVRMALRILE
AMPDGSGAAMLDGKMQDDATWKQAKVIVDLARLVAGRDPEFAALYGFG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcccggcgacttctatcgcccgctcgcgatcggggcaccgaccccgctgcgc
gaattgcccgtcgtgccggagcgcatgctccatttcttcccgccgcatctggccaaggtc
cgcgcgaaggtgccggagctggtcggcaaggtcgacgtgctggtcggcaatctcgaggac
gccatcccggccgatgcgaaggaggcggcgcggaccgggttcatcgaactggcggaggcg
gtcgacttccgggaaacgcggctgtggacgcgcgtcaacgcgctcaacagcccctgggtg
ctggatgacctgctgcaggtcgtcggccgggtgggccacaagctcgacgtagtgatgctg
ccgaaagtggaggggccctgggacatccactatctcgaccagttgcttgctcagctcgag
gcacggcaccggatcggccggcccatcctgatccacgcgctgctggaaaccgcgctcggc
gtgcgcaacgtcaacgagatcgccgccgccagcccgcgcatgcacggcatgagcctcggg
ccggcggacctggccgcgtcgcggggcatgaagaccacgcggatcggcggcggccatcct
tcctatggcgtgctggcggacgcgaccgcggacggcgccccccgcgccttcgtgcagcag
gacctgtggcacgccaccgtggtgcgcatggtcgatgcctgccgggccagccagctccgc
ccgttctacggcccgttcggggatttcgaggacccggccgcgtgtgaggcgcagttccgc
aacgccttcctgcttggctgcgtcggcgcctggacgttgcatccgagccagatcgccatc
gcccggcgcgtgttcagcccggagccggccgaggtccgcatggcactgcggatcctggaa
gcgatgcccgacggcagcggcgcggcgatgctggatggcaagatgcaggatgacgccacc
tggaaacaggccaaggtgatcgtcgatctggcccggctggtggcggggcgtgatccggaa
ttcgcggcgctgtatgggtttggctga
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