Rhodovastum atsumiense: RHOA_5846
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Entry
RHOA_5846 CDS
T08162
Symbol
ymdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K09769
2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:
3.1.4.16
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00230
Purine metabolism
rap00240
Pyrimidine metabolism
rap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RHOA_5846 (ymdB)
00240 Pyrimidine metabolism
RHOA_5846 (ymdB)
Enzymes [BR:
rap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
RHOA_5846 (ymdB)
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Paralog
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Motif
Pfam:
YmdB
Metallophos
DUF8161_C
Motif
Other DBs
NCBI-ProteinID:
CAH2604666
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All DBs
Position
RHOA:complement(6023059..6023874)
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AA seq
271 aa
AA seq
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MRILFLGDVVGRTGRDAVVKRLPGLREQLRIDMAVVNAENASHGFGLSPEMARAFFAAGA
DVITLGNHAWDRKEIIPYIAETPRLLRPMNFPPGTPGAGSVVVVLRGGHRVLVMTVMGRL
FMDALDCPFRATAVELSKHRIGVNCAAVIIDVHAEATSEKMAFGHSFDGQASLIVGTHTH
CPSADHQILPGGTAFQSEVGMCGDYDSVIGMQKEVAAARFWRKMPGERLSPAEGECTLCG
TFVEVDDITGLAKRIEPLRVGGRLSQTMPAV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcggattctgttcctgggcgacgtggtcgggcgcaccggccgggatgccgtggtgaag
cggctgcccggcctgcgcgagcaactgcgcatcgacatggcggtggtgaatgccgagaat
gcctcgcacggattcgggctgtcgccggaaatggcgcgtgccttcttcgccgccggcgcc
gacgtgatcacgctcggcaaccatgcctgggaccgcaaggagatcatcccctacatcgcc
gagacgccgcggttgttgcggccgatgaacttcccgcccggcaccccgggcgcgggcagc
gtggtggtggtgctgcgtggcggccaccgcgtgctggtgatgacggtgatgggccggctg
ttcatggatgcgctcgactgcccgttccgcgccaccgcggtggagctgtccaagcaccgc
atcggcgtgaactgcgccgccgtcatcatcgacgtccatgccgaggccaccagcgagaag
atggcgttcggccattccttcgacggccaggccagcctgatcgtcggcacccacacccac
tgcccctcggccgatcaccagatcctgcccggcggcaccgcgttccagtcggaagtgggc
atgtgtggcgactatgacagcgtcatcggcatgcagaaggaagtagcggcggcccggttc
tggcggaagatgccgggcgagcgcctcagcccggccgagggcgagtgcaccctgtgcggc
actttcgtcgaggtggacgacatcaccggcctggcgaagcgcatcgagccgctgcgcgtg
ggcgggcggctgtcgcagaccatgccggcagtgtag
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