Riemerella anatipestifer RA-GD: RIA_1216
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Entry
RIA_1216 CDS
T02007
Name
(GenBank) Cation/multidrug efflux pump
KO
K18138
multidrug efflux pump
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar01501
beta-Lactam resistance
rar01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RIA_1216
01503 Cationic antimicrobial peptide (CAMP) resistance
RIA_1216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rar02000
]
RIA_1216
01504 Antimicrobial resistance genes [BR:
rar01504
]
RIA_1216
Transporters [BR:
rar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RIA_1216
Antimicrobial resistance genes [BR:
rar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RIA_1216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ADZ12321
LinkDB
All DBs
Position
1205584..1208739
Genome browser
AA seq
1051 aa
AA seq
DB search
MKLAEVSIKRPSLVIVILALLLIGGLFSYKQLNYELVPKFEVKVVTVATIYPGASPTEVE
NTVSKKIEDAVSALEGVKKIQTKSYESLSIVIIQFNNDVNTDFAMNDTQRKINAIRSNLP
DGVKEPSLSQFSLSDLPVVSMGVTANLSENELYDLIDQKIQPEFSRISGVAKVNIVGGQE
REIRINLDPSKLQGYGLSIPQVVQIITASNLDFPTGNLQTRDNSTLIRLSGKIASVEELR
NLTIASMNGINIKLSDVAEVQDTQKKVEKIARINQQNTLLLQVQKQTDANAVTMSELVQK
KMKVIEEQYKDQGLKINLANDTSVFTLAAADSVLKDLLIAVALVAFVMLFFLHSFRNALI
VMVAIPTSLIATFIGIALFGFSLNLMSLLALSLVVGILVDDAIVVIENIHRHMEMGKNKV
RAAYDGAKEIGFTVTAITLVIVVVFLPIALSSGLVSDIIRQFCVTVVIATMLSLLVSFTV
VPWLFSRFGKLELISKDSIFGKVIYTFEDGLTKFTHFVTDLLKWCLNNKIKTFVVTFLLF
VSSIALLVMGYIGSDFFPRTDKGEFLVQIEMPKDVSIEQTNFMTQKAENYLAKNSNVATM
ITTVGQSSGGMGAVQSTPYKSEINVKLIDKSKRSEPSNVFAAKIKRELEPILVGAKVTTV
PMGLMGAEQAPLQMTVMGTTLDEALGYAKEAEKALKSIEGATEVKLSVEEGNPEISVNVD
RDKMTALGLNVATVGQTLRTAFSGNTDNKFRTGNSEYDINIILDESKRGSIDDVRNIEFT
NAQGQRIKLSQFAVVDFSSGPAVLERYDRSPAVTIQAQTIGKSMGAVANEWLAKLENVKK
PASVKWVWGGNMENQSEGFGSLGYALLAAILLVYMIMVVLYDDFVKPFIVLFSIPLSFIG
ALWALALTNQSLNIFTILGIIMLIGLVAKNAILLVDFANHRLEQGETIEDALIQANHARL
RPILMTTIAMVFGMLPIAMASGAAAEMNNGLAIVIIGGLLSSLFLTLVIVPVVYLIVVKL
ERKLAKEDKKDYDALMKADYEHLHPEDEIEF
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagcagaagtatccataaaaagacccagtttagttattgtaatcttggcacta
cttctcataggaggattgtttagttataaacaacttaattatgagctagtacccaagttt
gaagtaaaggtagttactgtggctaccatatatccaggggcatctcctaccgaggtagag
aatacagtgtccaaaaaaatagaagatgccgtttctgcactagaaggggtaaagaaaata
caaactaaatcttacgaaagtctttccattgttatcattcagtttaataatgatgttaat
acagacttcgcaatgaatgatactcaaaggaaaatcaatgccattaggtcaaaccttcct
gacggggttaaagagccttcgttatcacaattttcactttcagacttacctgttgtaagt
atgggggttaccgccaacttatctgaaaatgaactttatgatttgatagaccaaaaaatt
caaccagaattttctagaatctcaggtgttgctaaggtaaatattgtgggaggacaagag
cgagaaattcgtatcaatttagaccctagtaaattacaaggctatgggcttagcattccg
caggtggttcagataattacagcatctaacctagatttcccaacaggaaatttgcagacc
agagataactctacacttatccgtctttcagggaagatagcttcggtagaagagcttaga
aaccttaccattgcctctatgaatggtattaacattaaactttctgatgttgccgaagta
caagatactcagaaaaaggtagaaaaaattgctcgtatcaatcaacagaacaccttgtta
cttcaagttcagaaacaaactgatgccaacgccgttacaatgagtgagttggttcagaag
aaaatgaaagttatagaagagcaatataaagaccaagggcttaaaatcaatttggctaat
gatacttcggtattcacacttgcggcggcggattcggtgctgaaggatttacttattgcg
gtggcgttggtggcgtttgtgatgttgtttttcttgcatagttttaggaatgctcttatc
gtaatggtggctattcctacctctcttattgcaacatttatagggatagcgttgtttggg
ttctcgctcaatttgatgagtttactcgcgttatctttggtagtaggaatattggtagac
gatgccattgtggtaatagagaatatccaccgtcatatggagatgggtaagaataaagtt
cgtgcggcgtatgatggagctaaagaaataggctttaccgttactgctattactttggta
attgtggtggtatttttacctatagctttaagtagcggtttggtatctgatattatcaga
cagttttgtgtaacggtagttatagctacaatgttgtctttattagtgtcgttcaccgta
gtaccttggttgttctctcgttttggtaaactcgagctgattagcaaggactctatcttt
ggtaaagtaatttacacttttgaagatggtttaactaagttcactcatttcgtaacggat
ttacttaaatggtgtcttaataataagattaaaacctttgttgtaaccttcttacttttt
gtaagttctattgcactgcttgtaatgggctacattgggtcagactttttccctagaaca
gataaaggagagtttttggttcaaatagaaatgccaaaagatgtttctatagagcaaacc
aactttatgactcaaaaggcagaaaactatcttgctaaaaattctaatgtagctacaatg
attaccacagtggggcagtctagtggtggtatgggagcagtacagtctacgccgtataag
tcagaaattaatgttaaacttatagataaatctaaaagaagtgagccaagtaatgttttt
gctgcaaaaataaaacgagagctggagcctattttggttggtgcaaaagtaactaccgta
cctatgggacttatgggggcagaacaagcaccattacagatgacagtaatggggactaca
ttagatgaagctttaggctatgctaaagaagcagaaaaagcattgaaatctatagaaggt
gccacggaagtgaaactgagtgtagaagaaggtaacccagagatttcggtaaatgtagac
agagataaaatgacggctctaggtcttaatgtagcaaccgtagggcagacattgagaacg
gcttttagtggaaataccgataataaattccgtacaggaaatagtgaatacgacatcaat
atcatcttagacgaatctaaaagaggtagtatagatgatgtgagaaatattgagtttacc
aatgctcaagggcagaggataaaattatcacaatttgctgtggttgacttctcttctggt
cctgccgttttggagagatacgaccgttcaccagctgttactatacaagcccaaaccata
ggtaaaagtatgggagctgtggctaacgaatggcttgccaagttagaaaatgtaaagaaa
cctgccagcgtaaaatgggtatggggtggtaatatggaaaaccaaagtgaaggttttggc
tctctagggtatgcattactagcggcaatattattagtatatatgattatggtagtgctt
tatgacgattttgtaaaaccatttattgtactattttccattcctctttcttttattgga
gcgttgtgggcattggctcttaccaatcagagtttaaatatctttaccattttagggatt
attatgttgattggtttggtggcgaagaatgccattctcttggtagattttgctaaccat
agattagagcaaggtgaaaccatagaagatgctttaatacaagccaaccacgctagactt
cgtcctattttgatgactacgatagcgatggtgtttggtatgcttcctatcgcgatggct
tcgggagcagcagcagagatgaataacggtttggctattgtaattatcggagggttatta
tcatcattattccttacattagtaattgttccagtggtatacttaattgtagtaaaactg
gaaagaaaactggctaaggaagacaaaaaagattacgacgctctaatgaaagcggattat
gaacaccttcatccagaagatgaaatagagttttag
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