Rhodamnia argentea (silver malletwood): 115728865
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Entry
115728865 CDS
T10595
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04075
Plant hormone signal transduction
rarg04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115728865
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
115728865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rarg03000
]
115728865
Transcription factors [BR:
rarg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
115728865
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
115728865
NCBI-ProteinID:
XP_030515138
UniProt:
A0A8B8MYE4
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Position
6:complement(15534783..15540044)
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AA seq
722 aa
AA seq
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MPLFELYRRAQEKLNSSQDRGQSCSADLSFIPENEFVELRWENGQVVMQGQSSRPKKSQS
SFGLPSEFTSQSPWISGKGVGNGAASNAKKFEAELDSGLSEFPMSTPPSEMCLTHDEDIV
PWFNCPINEPLRNDYSSDFLPELPGVPVNELSNLYSFDSTQKSKNKEEVCPERVNGAKVP
SAADVEITGMGMNTALPSLQQGVMDTLGSSKGGISYNSTFGDFSRLPRLAVGSTSEQGQA
KDTTLSAKSSNFINFSHFARVAAPSHSNIENHARASGLGSSNLERTAWKEKYSSANDNIT
ADNLASNLSVCPRTEASSNCQVQREQPMVASKPLICQEDALKNDKSADQSFCASSSKGSP
DNDKMIELVAASSSVCSGNSAERASDAPPCSLKRKCPSADNSDLAEDVDEDSVGVKKAVA
ATARSTSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKS
LQLQVQMMSMANGLYMPPMMFPTGIQRIHPSQMAQFSPMGIGMGLGVGMVGVNCGTHVPM
PHVSASNTLHRTVAPNFPLMGLPGQGLPMSMPCLSSLVPFPGVPLLKPGTGPKTSTFGGP
GTMENTDAATTSSLKESIQNVDSASCVTNHTSSQFQGRNGDFQKSTSVQNTCPASDINGR
GVADSANRNSTRLVREDCVLYAAHDGSLMERYLFTQVTPSKIFLFCLLCNLLYTTGNPRL
SR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccattgtttgagctgtatagaagggctcaagagaagctcaattcaagccaagacagg
ggccaatcatgttcagcagatctgtcattcataccagagaatgagtttgttgagcttaga
tgggaaaatggtcaggtcgtgatgcaaggacagtccagtaggcccaaaaagagccaatct
agttttggtttaccgtctgaattcacttctcagagtccttggattagcggtaaaggtgtg
ggcaatggtgctgcttcgaatgctaaaaagtttgaggcagagctggactctgggttgagt
gaattcccaatgtccacaccgcccagcgaaatgtgtttgacccatgatgaggatatcgtg
ccctggtttaattgtcccatcaatgagcctttacgaaatgattacagctccgatttcctc
cctgaattgccgggtgtcccagtaaatgagctttccaatctgtatagttttgattcaacc
caaaagagtaaaaataaagaggaggtttgtccagagcgtgtgaacggtgccaaggttcct
tctgcagcagacgttgagataactggaatgggaatgaatacagcattgccgtctcttcag
caaggagtcatggacactctcggttctagtaaaggcggtattagctacaattctactttt
ggagactttagtcggttgccaagattagcagttggatctacaagtgaacaaggtcaagct
aaggataccacactgtctgccaaaagttctaattttatcaacttctctcattttgcaaga
gtggccgctccttcccactccaatatagagaaccatgccagagccagcggcttgggctca
tcgaacttggagagaactgcatggaaagaaaagtattcttcagctaatgataacattact
gctgataatctggcgagcaacttgagtgtttgtccaaggacggaagcaagttcaaattgc
caagtccaaagggagcaaccaatggttgcctcaaagcccttgatttgccaagaagatgct
ttgaagaatgataaaagtgctgatcaaagtttttgtgcgagttcaagtaaaggatcacca
gacaacgacaagatgatagagcttgtcgctgcctcttcctctgtttgctcgggaaacagt
gcagagagagcttcagatgctccaccgtgcagtttaaagaggaaatgtcctagcgccgac
aattctgaccttgctgaagatgttgatgaagattcagttggcgtgaaaaaagcggtagca
gcaactgctcgcagtactagttccaagagaagccgagcagccgaagtacataatttatct
gaaaggagaaggagggacaggatcaacgagaagatgcgtgcattgcaagaacttatacca
aactgcaataaggtggacaaagcatcaatgcttgatgaggccattgagtatctgaagtcg
cttcaactccaagttcagatgatgtcaatggcaaatggcttgtacatgccaccaatgatg
tttccgacgggaattcagcgaatacatccctcacagatggctcaattttcgccgatgggt
attgggatgggtttgggtgtgggcatggtcggcgtgaattgtggaacacatgtccccatg
cctcatgtgtctgcctcgaacactttgcaccgtacagttgcgccaaactttccattgatg
ggtcttcctggtcaaggacttcctatgtcgatgccatgcctgtcgtccttagttccattt
ccaggagtgcctcttttaaagccgggaacagggccaaaaacctctacctttggagggccg
ggtactatggaaaatacagatgcggccacaacttccagtctaaaggagtcgattcagaac
gtcgatagtgccagttgcgtaacaaatcatacatccagtcagttccaaggaagaaatggc
gattttcaaaagtctacatcagtgcaaaatacctgtccagcctctgatatcaacggacgt
ggggttgctgattctgctaaccgaaacagcactagacttgttagagaagattgtgttttg
tatgcagctcatgatgggtccttgatggagaggtatttgttcactcaagtaacaccatcg
aagattttcctcttttgccttctctgcaacttactttacacaactggaaaccctcgtttg
agtcgatga
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