KEGG   Rhodamnia argentea (silver malletwood): 115739132
Entry
115739132         CDS       T10595                                 
Name
(RefSeq) sm-like protein LSM3B
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03018  RNA degradation
rarg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115739132
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115739132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rarg03019]
    115739132
   03041 Spliceosome [BR:rarg03041]
    115739132
Messenger RNA biogenesis [BR:rarg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115739132
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     115739132
Spliceosome [BR:rarg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    115739132
 Complex C
  U2 snRNP components
    115739132
SSDB
Motif
Pfam: LSM TIG_SUH Glutaredoxin
Other DBs
NCBI-GeneID: 115739132
NCBI-ProteinID: XP_030527940
UniProt: A0A8B8NZF0
LinkDB
Position
2:complement(32403404..32405387)
AA seq 97 aa
MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVE
IDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggcgagcgaggaagagagcgcggtgaaggagcctttggatctgatcaggctcagcctc
gacgagcgtatctacgtcaagctccgctccgaccgcgagctccgaggcaagctccatgca
tatgatcagcatttgaacatgatactcggggatgttgaggaagtcgttactactgtagaa
attgatgatgaaacttatgaagagattgtacggaccacaaaacgcacagttccatttctc
tttgttagaggggatggtgtcattttggtatctcctcctctaaggacggcatga

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