Rhodamnia argentea (silver malletwood): 115740208
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Entry
115740208 CDS
T10595
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04075
Plant hormone signal transduction
rarg04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115740208
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
115740208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rarg03000
]
115740208
Transcription factors [BR:
rarg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
115740208
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_L18_c
Motif
Other DBs
NCBI-GeneID:
115740208
NCBI-ProteinID:
XP_030529527
UniProt:
A0A8B8P447
A0A8B8P3X1
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Position
1:complement(8842030..8847057)
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AA seq
708 aa
AA seq
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MPLFEFLKMAKAKLDSSLEKPTSTSTGLSSVPENELVELTWENGQVVLQGQYSRAKRSPF
SNNSPSNGSKPREGASGDGTRPKSGKFRDLECGLSEFPVTQPLSEIGLVQEDDIGPWLSF
PISGSLQNDYCSDFLPELAGVALNETSPGNDFGAIDKSSSRIYRESHGIDNGVHCLGQTD
ASKFSSSEAGETTIDRTGSSQLYSLQNQQFLSPLQCFRSRALDNASTSTSSSTSQAVCGD
KVRLPTSVVVCSTVKVQRQDLEHSDKSSSFTNFSCFSQPASLYKVNDAESSGPAAGFGLS
SADRSVSKEKASSIDNSTLSGSNFAVSSNGVQKQRKIDSSKSFDGEQHEQQFSAGHSEAI
CPENTSKNAKLSCQNYQASVCKGSTEGEKMTEHVVGSSSICSGNSVERVLDDPKRNLKRK
SHETDESDDPSEDVEEDPTCEKKQNPARGTSKRSRAAEVHNLSERRRRDRINEKMRALQE
LIPNCNKVDKASMLDEAIEYLKTLQLQVQQMMSMGAGMYMPPVMVPTGLHPAQMPLYPPF
GIGMGSAIGFGMGMVDMNSRSSGRPVVQVPPLQGPHFPSPLMSAGMTGANLQMFGFPGQG
IPLPMPRTPLVPFPGEPVMKPAVGLGAYGMPSSMENPDSAVASTSKEAPQNINKEALQNT
ASICLKNQSSSQQPALAQSSCHISDVNGSMAIESTGNDVGSSKASCGS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgttcgagttcctcaagatggccaaagctaagcttgactcaagcctagagaaa
cccacatctacttcaactggtctttcttctgtacctgaaaatgagcttgtagagttaaca
tgggaaaatggtcaggttgtgctacagggtcaatatagtcgagctaaaaggagccccttc
agtaataattcaccttcgaatggatcgaaacctagagaaggagcttcaggtgatggtacc
agacccaagtccgggaagtttagggatctcgaatgtggattaagcgaatttccggtgact
caaccgttgagcgaaattggtttggtacaggaggatgacattgggccttggttgagtttc
cctattagtggatctttacagaatgattactgttctgatttcttgcctgaactggctgga
gtcgcactaaatgagacttcccctggaaatgatttcggggcaatcgacaaaagttctagt
cggatatatagggagtcccatggcattgataatggcgttcattgtctgggacaaacagat
gcatcgaagttttcttcttctgaggcaggcgaaactacaatcgatagaactggctctagt
caactatattccttgcagaaccagcagttcttatcgccattacagtgtttcagatcaaga
gccttggataatgcgagcacaagtacaagcagcagcacgtcccaagctgtttgtggggat
aaagttcggttgccaacctctgtggtagtatgttctactgtaaaggtacagaggcaggat
ttagagcattcagataagagttccagttttacgaatttctcctgtttttcacaacccgct
tctctctataaagttaatgatgctgagagcagtggccctgcggctggtttcggtttgtcg
agtgcagatagatcagtcagtaaggaaaaggcttcatctatcgataatagcaccctcagt
ggatcaaattttgctgtctcaagcaatggtgtgcagaagcagagaaagattgattcctca
aaatcatttgatggagagcaacatgagcaacagttttctgctgggcactcagaggctatc
tgcccggagaacacctctaagaatgctaagctgtcttgtcaaaattatcaagcaagcgtt
tgtaaaggatcaactgagggtgaaaagatgacagagcatgtggttggttcttcttccatt
tgctcaggcaacagcgtggaaagagttttagatgaccccaaacgcaatttgaagaggaaa
tctcatgagactgatgagtctgacgatcccagtgaggatgttgaagaagatccaacctgc
gaaaagaagcaaaatcctgctcgaggtacttcaaaaaggagccgagcagcagaagtgcat
aatttatctgaaaggaggcgaagggacaggatcaatgagaaaatgcgtgcactacaggag
ctcattccaaattgcaacaaggtggacaaagcttcgatgcttgatgaggcaatagagtat
ctcaagacgcttcagcttcaagtgcagcagatgatgtcaatgggagctggtatgtacatg
ccacctgtgatggtacccacgggactgcatccagcacaaatgccgctttacccacccttt
ggcattgggatgggatcagcaatcggatttgggatgggtatggttgacatgaacagccgt
tcttctggtcgaccagtggttcaagttccgccattgcaaggtccacattttcctagccca
ctgatgtcagcagggatgacaggagcgaatctccagatgtttggttttcctggtcaagga
attcctctaccaatgcctcgcacgccactagttccttttccaggtgaaccagtgatgaaa
ccagcagtgggactcggtgcctatggaatgccgtcttctatggaaaatccagattcagct
gttgcctcgacatcaaaggaagcaccacagaacattaacaaggaagcgctgcaaaatact
gcttccatttgcttgaagaatcagtcatccagtcagcagcctgctctggcacaaagtagc
tgccatatctcggatgttaatggaagcatggctattgagtccactggaaatgatgttgga
tccagcaaagcaagttgtggatcctga
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