Rhodamnia argentea (silver malletwood): 115744541
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Entry
115744541 CDS
T10595
Name
(RefSeq) DNA ligase 4 isoform X2
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03450
Non-homologous end-joining
Brite
Enzymes [BR:
rarg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
115744541
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
115744541
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GFIT
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NCBI-GeneID:
115744541
NCBI-ProteinID:
XP_030535631
UniProt:
A0A8B8PLE8
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Position
4:complement(18166716..18182738)
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AA seq
1154 aa
AA seq
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MSGDTKFSVLVSLFNWMQKSKSSAQKRSKFRKFLDTFCKPSDYFSAIRLILPSLDRERGT
YGLKESVLATCLVDALGMSRDSEDAVRLFNWRRGGPKSGANAGNFALVAAEVLQRRQGMA
SGGQTIKELNDLLDRLASSENRSEKTSVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS
IFHEFHPDAEDLFNVTCDLKLVCEKLRDRGQRHKRQDIEVGKAVRPQLAMRIGNAAAAWK
KLHGKEVVVECKFDGDRIQVHKNGSEIHFFSRNFLDHTEYGPGMSDIIINNIVVDRCILD
GEMLVWDKSANRFAEFGSNQEIAKAARDGLDSDRQLCYISFDILYAGDTSVIHQTLKERH
ELLRKVVKPLKGRLEILVPDEGLNSHRPPGEPCWSLLAHNMEDVERFFKETIENRDEGII
LKDLSSKWEPGDRSGKWLKLKPEYIHASADLDVLIIGGYYGSGRRGGEVAQFLVGLAECP
PANTYPRRFISFCRVGTGLSDEELEAVVTKLKPYFRKYEFPKKSPPSFYQVTNHSKERPD
VWIESPEKSIILSITSDIRTISSEVFAAPYSLRFPRIDRVRWDKAWHDCLDVQSFVELVR
SSNGTTHGGMEYKGRLASGLKRKRSSDKGKGEKRNLTIVPSHFMRTDISGVKGETRIFSS
LMFYFVNVPSNLSLDALHKMVVENGGTFSMNLNDSVTHCIAAESKGIKFQVAKQRKDIIH
YSWVLDSCSQKKLLPLQPKYFLFLSDISKRKLQEEIDEFSDSYYWDLELADIKQLLNNVE
RSEDPHRVDYYKKKFCPSEKWSCFHGCCIHFCSSMKALKPEWDLLLRLMQRRLELEVLWG
GGEVSNHLGHATHVVVVSEPGTSVDIDTILRSLNAPGKRLLSKKKLHVVDFKWLEDCMER
GGKLPEDPYDLRTTWIEDSGTAWIEESDTGVCKHEANQERSVSSLCKEEEQLSSFEEEAV
ASEDQTGDKRRKGRPASIRRNRGKSSSSQAVRKRTRLGKKPAKISGNESDGSSSAAETAP
AYTKNKKDNRIHETLKDEMAESPDNVKIEILESLLGGRTEESRCADPREGTSSNDQKTEF
GAKHDDQYIGKMEIRSDPVEAMLLDMIPSLGMRKMETTEPSVEKEKLPLDPVEQPQKKKR
VSYKDVAGELLKDW
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgacaccaaattcagcgttctcgtcagcctcttcaactggatgcagaagagc
aagtcctccgctcagaagcgctccaagttccgaaagtttctcgacaccttctgcaagccc
agcgactacttcagtgccatccgcttgatccttccctcgctcgatcgcgaacgcggcacc
tatggcctcaaggagtccgtcctcgcgacctgcctcgtcgacgctctcggcatgtcccgg
gactctgaggacgctgtccgcctcttcaactggcgccgcggaggccccaagtccggtgcc
aatgctggcaattttgctctcgtcgccgctgaggtgctgcaacgtaggcaaggaatggca
tctgggggccaaaccattaaggagttaaatgatttgcttgaccgtttggcatcgagtgaa
aacaggtcagaaaagacttcagttctttctactttgataaagaagacaaatgcccaggag
atgaagtggattatcatgatcattcttaaagatctgaagttaggcatcagtgaaaagagc
atattccacgaatttcatccagatgctgaggatttgttcaatgtcacctgtgatttgaaa
ttggtctgtgagaagcttagagatcgtggccaacggcataagcgccaggacatagaagtt
ggcaaagctgttcgtcctcaacttgcaatgagaattggaaacgcagctgctgcatggaaa
aagcttcatggaaaggaagtggtggttgaatgcaaatttgatggtgaccgcatccaagtt
cacaagaacggatctgagatacattttttttccaggaattttctggatcacacagaatat
ggaccaggaatgtcagacatcataatcaataatattgtggttgatagatgcatccttgat
ggtgagatgctggtttgggacaagtctgcgaatcgttttgccgagtttggttcaaatcag
gaaatagcgaaggcagcgagggatgggcttgacagtgatagacagttgtgctatatttca
tttgacatcctgtatgctggggataccagtgttattcaccaaaccttgaaggaaagacat
gagcttctccggaaagttgtgaagcctttgaagggtcgtttggagatcttggtacctgat
gaaggactcaacagtcaccgtcctcctggggagccttgttggtctcttcttgctcataat
atggaagatgtcgagaggtttttcaaagaaacaattgagaacagagacgaaggaatcatc
ttgaaagatctcagttccaaatgggagccgggtgatcggagtggaaagtggttaaagctg
aagccagagtatattcatgctagtgctgacttggatgttcttatcataggaggatactat
ggatctgggcgtcgtggaggcgaggtggctcaatttttggttggtcttgctgagtgtcca
cctgcaaacacatatcctagacgattcatttccttttgtagagtgggtaccggactttct
gacgaggaactcgaggctgttgttaccaaattaaagccatactttaggaaatatgaattc
cctaagaagtcaccaccaagcttttatcaagtgacaaaccattcaaaggaaagaccagat
gtctggattgagagtcctgagaaatccattatactttctataactagtgacatccggacc
ataagttctgaggtgtttgctgctccatacagtctaagatttccgcgaattgacagagtt
agatgggataaggcttggcatgactgtcttgatgtccagtcttttgtggaactagtacgt
tcgagcaatggtactacacatgggggaatggagtacaaaggccggctggcaagtgggcta
aagcgtaagaggtcttctgataaaggaaagggagagaaaaggaacttgactattgttcct
tctcattttatgcgaactgacatttctggcgtcaaaggggaaactcggatattttcaagt
ttgatgttctactttgtaaatgttccttcgaacctttctcttgatgcgttgcataaaatg
gttgttgagaatggtggcactttctccatgaatctgaatgattcggttacccactgtatt
gcagctgaaagcaaggggatcaagtttcaggtggcaaaacaaagaaaagatattattcat
tactcatgggtcctggattcttgttcacaaaaaaagcttcttcctctgcagccaaagtac
tttctcttcctatctgatatatcaaagaggaaattgcaagaagaaatcgatgagttttct
gactcttactattgggatcttgaacttgcagatatcaaacaacttttaaataatgtggaa
agatcagaagaccctcatcgtgttgattattacaagaaaaaattctgcccatcagagaag
tggtcatgctttcatggatgctgcattcacttctgttcttcaatgaaggcattaaaacca
gaatgggatctcttgttgaggctaatgcaaaggaggttggaactggaagtgttgtggggt
ggtggcgaagtcagcaatcatcttggacatgctactcacgtggttgtagtgtcagaacct
ggaacttcagttgatatcgatacgatcttgagaagcttaaatgcacctgggaaacgtctt
ctaagtaagaagaaattgcatgtagttgatttcaaatggttggaagactgcatggaaaga
ggtgggaaattgcctgaggatccgtatgacttgagaactacttggatagaagattcaggc
actgcctggatagaagagtcagacacaggagtctgcaaacatgaggctaatcaagagagg
tcagtttcgagcttgtgcaaagaggaggaacagttatcgtcttttgaggaggaggcggta
gcttcagaagaccagactggtgacaaaagaagaaaaggaagacctgcttccatccgcaga
aatagaggaaaaagtagtagcagtcaagctgtgaggaagcgaacacgtcttggaaagaaa
cctgcaaaaatatcgggaaatgaatctgatggaagcagttctgctgctgaaacagcgccc
gcatatacaaagaacaaaaaagacaatagaattcatgaaactttaaaggatgagatggct
gagagtccagacaatgtgaaaattgagattttggagtctttactaggaggcaggacagag
gagtcaaggtgtgctgatccacgggaaggaacgtcaagcaatgatcagaaaacagagttt
ggggcgaagcatgatgaccaatacatcgggaagatggaaattaggagtgacccagttgaa
gctatgctattggacatgatcccaagccttggaatgagaaagatggagacaaccgagcca
tctgttgaaaaggagaagctcccacttgatccggttgagcagcctcagaagaaaaagaga
gtaagttataaggatgttgccggtgagctgcttaaggattggtaa
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