Rhizobium bangladeshense: J2J98_18695
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Entry
J2J98_18695 CDS
T07228
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J2J98_18695 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rban03400
]
J2J98_18695 (nth)
Enzymes [BR:
rban01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J2J98_18695 (nth)
DNA repair and recombination proteins [BR:
rban03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J2J98_18695 (nth)
Prokaryotic type
J2J98_18695 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HRDC
HHH_5
PsbU
Motif
Other DBs
NCBI-ProteinID:
QSY88166
LinkDB
All DBs
Position
3879293..3880090
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AA seq
265 aa
AA seq
DB search
MTAEYRVSMANPKLKSPPQGTNVITRRKPAAVVKTAYSQAEREEIFRRFSVQRPEPRGEL
EHTNPFTLVVAVALSAQATDAGVNKATRALFTVADTPQKMLDLGEEKVRDYIKTIGLYRN
KAKNVIALSQMLVDEFAGKVPETREELVRLPGVGRKTANVVLSMAFGQATMAVDTHIFRI
ANRIRLAPGKTPDEVEARLMRVVPKHYLYHAHHWLILHGRYTCKARRPECERCVIADICK
SPEKSSDVPAPLIELPPQVIGEAVE
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgagtatagagtttctatggcgaatccgaaactcaaatccccgccgcaaggc
acgaatgtgattacccgccgcaagccggcggcggtggtcaagaccgcctattcgcaggct
gagcgcgaggaaatcttccgtcgcttttcagtgcagcggcccgagccgcggggtgagctg
gagcataccaatccttttacccttgtcgtggcggtggccctctccgcccaggccaccgat
gccggtgtcaacaaagcgacgcgggcgctgttcacggtggccgatacgccgcagaaaatg
ctcgatctcggcgaagagaaggttcgcgattacatcaaaacgatcggcctttaccgcaac
aaggcgaaaaacgtgatcgcgctctcgcaaatgttggtcgacgaattcgccggcaaggtc
ccggaaacccgcgaggaactagttcggctgccgggcgtcggccgcaagactgccaatgtc
gtgctgtccatggcctttggacaggcaaccatggcggtcgatacacacattttccggatc
gccaatcgcatcaggcttgctcccggcaagacacctgatgaagtcgaagcgcgattgatg
agagtggtgccgaaacactacctctatcatgcccatcactggctgatcctgcacggacgc
tacacctgcaaggctcgccgtcccgaatgcgaacgctgcgtcatcgccgacatttgcaaa
tcgccggagaagagttcggatgtgccggccccactcatcgagctaccgccgcaagtgatc
ggcgaggctgtcgagtaa
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