Rhizobium bangladeshense: J2J98_19810
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Entry
J2J98_19810 CDS
T07228
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00020
Citrate cycle (TCA cycle)
rban00270
Cysteine and methionine metabolism
rban00620
Pyruvate metabolism
rban00630
Glyoxylate and dicarboxylate metabolism
rban00680
Methane metabolism
rban00710
Carbon fixation by Calvin cycle
rban00720
Other carbon fixation pathways
rban01100
Metabolic pathways
rban01110
Biosynthesis of secondary metabolites
rban01120
Microbial metabolism in diverse environments
rban01200
Carbon metabolism
Module
rban_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rban_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rban_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J2J98_19810 (mdh)
00620 Pyruvate metabolism
J2J98_19810 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
J2J98_19810 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
J2J98_19810 (mdh)
00720 Other carbon fixation pathways
J2J98_19810 (mdh)
00680 Methane metabolism
J2J98_19810 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
J2J98_19810 (mdh)
Enzymes [BR:
rban01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
J2J98_19810 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
DUF357
WASH-4_N
Motif
Other DBs
NCBI-ProteinID:
QSY88370
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All DBs
Position
complement(4113384..4114346)
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AA seq
320 aa
AA seq
DB search
MARNKIALIGSGMIGGTLAHLAGLKELGDIVLFDIADGIPQGKGLDIAQSSPVEGFDANL
TGASDYSAIEGADVCIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPNAFVICIT
NPLDAMVWALQKFSGLPANKVVGMAGVLDSSRFRLFLAKEFNVSVQDVTAFVLGGHGDTM
VPLARYSTVGGIPLTDLVTMGWVTKERLEEIIQRTRDGGAEIVGLLKTGSAYYAPAASAI
EMAESYLKDKKRVLPCAAHLTGQYGVKDMYVGVPTVIGVGGVERVIEIDLNKTEKEAFDK
SVAAVAGLCEACINIAPALK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaacaagatcgcactcattggttctggtatgattggtggcacgctggcgcat
ctcgccggcctgaaggagctgggcgatatcgtcctcttcgacatcgccgacggcatcccc
cagggcaagggtctcgacatcgcacagtcctctccggtcgaaggtttcgacgccaatctg
accggcgccagcgactattcggcgatcgaaggcgctgacgtctgcatcgtcaccgccggg
gtcccgcgcaagccgggaatgagccgcgacgatcttctcggcatcaaccttaaggtcatg
gagcaggtcggcgccggcatcaagaaatatgcgcctaacgctttcgtcatctgcatcacc
aacccgctcgacgccatggtctgggcgctgcaaaagttttccggcctcccggcgaacaag
gtcgtcggcatggcaggcgttctcgattcctcgcgcttccgtctcttcctcgccaaggaa
ttcaacgtctccgttcaggacgtgacggccttcgttctcggcggccacggcgacacgatg
gtgccgctcgcccgttactcgacggtcggcggcattccgctcaccgacctcgtcaccatg
ggctgggtcaccaaggagcgcctcgaagagatcatccagcgcacccgtgacggcggcgcc
gaaatcgtcggcctcctgaagaccggctcggcctattatgcgccggccgcctcggcgatc
gaaatggccgaatcctacctcaaggacaagaagcgcgtcctgccttgcgctgctcatctc
actggccaatacggcgtcaaggacatgtatgtcggcgttcccaccgtcatcggcgtcggc
ggcgtcgagcgcgtcatcgagatcgacctcaacaagaccgagaaggaggccttcgacaag
tcggttgccgccgtcgccggtctctgcgaggcctgcatcaacatcgcgcctgccctgaag
taa
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