Rhinopithecus bieti (black snub-nosed monkey): 108521910
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Entry
108521910 CDS
T04641
Symbol
PCDH15
Name
(RefSeq) protocadherin-15
KO
K16500
protocadherin-15
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rbb03037
]
108521910 (PCDH15)
04515 Cell adhesion molecules [BR:
rbb04515
]
108521910 (PCDH15)
Cilium and associated proteins [BR:
rbb03037
]
Primary cilia and associated proteins
USH complex and associated proteins
108521910 (PCDH15)
Cell adhesion molecules [BR:
rbb04515
]
Cadherins
Protocadherins
108521910 (PCDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
CshA_repeat
Motif
Other DBs
NCBI-GeneID:
108521910
NCBI-ProteinID:
XP_017717423
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
MSESLPSTKNSTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNSTGRV
LDRDPPMNIHSIVVQVQCINKKVGTIIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPV
GTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNVVLRKRLNY
EDKTRYFVIIQANDRAQNLNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTY
QAAIPELRTPEELNPIVVTPPIQAVDQDRNIQPPSDRPGILYSILVGSPEDYPRFFHMHP
RTAELSLLEPVNRDFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQG
YILESAPVGATVSDSLNLTSPLRIVALDKDIEDVPPSGVPTKDPELHLFLNDYTSVFTVT
QTGITRYLTLLQPVDREEQQTYTFSITAFDGVQESEPVIINIQVMDANDNTPAFPEISYD
VYVYTDMRPGDSVIQLTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIV
GRTYALTVQAADNAPPAERRHSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRVGAVL
LNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGKALDRESTDRYILIITASDSRP
DGTSTATVNVVVTDVNDNAPVFDPYLPRNLSVVEEEANAFVGQVKATDPDAGINGQVHYS
LGNFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDN
SPVFTNSMYTVLVEENLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELS
LLRSLDYEAFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKGLPASRVRYRVDDVQFPY
PASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSATVKILVLHPGEIPR
FTQEEYRPPPVSELATKGTMVGVISAAAINQSIVYSIVSGNEEDTFGINNITGVIYVNGP
LDYEIRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENNHPPVFQKKFYIGGVS
EDARMFTSVLKVKATDKDTGNYSVMAYRLIIPPIKEGKEGFVVETYTGLIKTAMLFHNMR
RSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLVEKKIEDLTEILDRY
VQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRAIDRNELFKFLDGKL
LDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLALAFIIILCCIPAILV
VLVSYRQFKVRQAECTKTARIQAALPAAKPAAPAPAPVAEPPPPPPPPPPPGAHLYEELG
DSSMHKYEMPQYGSRRRLLPPAGQEEYGEVVGEAEEEYEEEEEEPKKIKKTKVEIREPSE
EEEVVVTIEKPPAAEPTYTTWKRARIFPMIFKKVRGLADKRGIVELEGEEWQRRLEEDDK
DYLKLTLDQEEATESTVESEEESSSDYTEYSEEESEFSESETTEEESESETPSEEEESST
PESEESESTESEGEKARENIVLARRRPIVEEVKEVKGRKEEPQEERKEPKVEEEEHSEEE
DHGPVLVEESTDLEAQDVPEEGSAESATVEGGVESEEESESGSSSSSSESQSGGPWGYQV
PAYDRSKNANQKKSPGANSEGYNTAL
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatctctgccttccaccaaaaatagtacaattctggtggacaatatgctgatc
aaagggactgctggaggaccagaccccaccatagaactttctttaaaggacaatgtggat
tactgggtgttgatggatcctgttaagcaaatgcttttcctgaacagcaccgggagagtt
ctggatagagatccaccaatgaacatacactccattgtggtgcaggtccagtgcatcaac
aaaaaagtgggcacgattatctaccatgaagtgcgaatagtggtgagagacaggaatgac
aactcacccactttcaagcatgaaagctactatgccacagtaaatgagctcactccagtt
ggtaccacaatattcacaggattttcaggagacaatggagctacagatatagatgatgga
ccaaatggacagatagagtatgttattcagtataatccagatgatccgacatccaatgac
acctttgaaattcccctaatgttgactggaaatgtagtgttaaggaagagactcaactat
gaagataagactcgctactttgtcataatccaagctaatgaccgtgcccaaaatctgaac
gagaggcgaaccaccaccactactctcacagtggatgttctggatggagatgacttaggt
ccaatgtttcttccttgtgtccttgtgccaaacactcgtgattgccgtccactcacttat
caagctgccatacctgagttgagaactccggaagaactgaaccccattgttgttacgcca
ccaatccaagctgtagatcaggaccggaatattcaaccgccatcagataggccaggaatc
ctctattctatccttgttgggtctcctgaggattacccacgatttttccatatgcatcct
aggacagcagaacttagtctcctggagccagtcaacagagactttcaccagaaatttgat
ttggttattaaggctgaacaagacaatggtcatcctcttcctgcctttgccagtctacac
attgaaatactggatgaaaacaatcaaagcccatattttacaatgcccagttaccaaggc
tatatcctggaatctgccccagtgggagcaaccgtttcggacagtctcaatttgacctca
cctttaagaatagtagctctggacaaggacatagaagatgttccacccagtggagttcct
acaaaagacccagagcttcacctttttctgaatgactacacctccgtcttcaccgtcaca
cagactggtattactcgctacctcaccttacttcaaccagtggacagggaagaacagcaa
acttacaccttttcgataacagcatttgatggtgtacaagaaagtgagccagtcatcatc
aatattcaagtgatggatgcaaatgataacacaccagccttccctgaaatatcctatgat
gtgtatgtttatacggatatgagacctggggacagtgtcatacagctcactgcagtcgac
gcagacgaggggtcaaatggggagatcacatatgaaatccttgttggggctcagggagac
ttcatcatcaataaaacaacaggacttatcaccatcgctccgggggtggaaatgatagtc
gggcggacttacgcactcaccgtccaagcagcggataatgctcctcctgcagagagaagg
cactccatctgcactgtgtacattgaagtgcttccaccaaataatcaaagccctcctcgc
ttcccacagctgatgtatagccttgaaattagtgaagccatgagggttggtgctgtttta
ttaaatctacaggcaactgatcgagagggagacccaataacatacgccattgagaatgga
gatcctcagagagtttttaatctttcagaaaccacggggattctaaccttagggaaagca
ctggacagggaaagcactgatcgctacattctgatcatcacagcttcagatagcaggcca
gatgggacctcaactgccacagtaaacgtggtggtgacagatgtcaatgacaatgctcca
gtgtttgatccttatctgccaagaaatttatctgtggtggaggaagaagccaatgccttt
gtgggtcaagtaaaagcaacagaccccgatgctggaataaatggtcaagtgcactacagt
ttgggtaactttaataatctttttcgtatcacatccaatgggagcatttacacagcagtg
aagcttaacagagaagtcagggactactatgaacttgttgttgtggcaacagatggagca
gtacaccctcgtcattcaactctaaccctggccatcaaggttttggacattgatgataat
agtcctgtgttcaccaattcaatgtacactgtccttgttgaggagaatctgccagctggg
accaccattcttcaaatagaggccaaagatgtcgaccttggagcaaatgtgtcttaccgg
ataagaagcccagaagtgaagcatttttttgcactacatccatttacaggagaactatcc
cttttaaggagtttagattatgaggcatttccagaccaagaagcaagtatcacttttctg
gtagaggcctttgatatttatggaacaatgcctcctggtattgctaccgtcacagtgatt
gtaaagggattacctgcaagtcgtgtgaggtatagagtagatgatgtccagtttccttac
cctgccagtatttttgatgtggaagaagattctggaagagtaataacacgagtcaatctt
aatgaagaacctacaacaatttttaagttggtagtggttgcttttgatgatggtgagcct
gtgatgtccagcagtgccacagtgaagattcttgtcttacatcctggtgagatcccacgc
ttcacacaggaggaatatagacctcctccagtaagtgaacttgccaccaaaggaaccatg
gttggtgtaatttctgctgctgccattaatcaaagtattgtgtactccattgtttcagga
aatgaagaagatacatttggaattaataacatcacaggtgttatctatgtgaatggacct
ttggattatgagatcaggacaagctatgttcttcgagtccaagctgattccctggaagtg
gtccttgccaatctccgagttccttcaaaaagcaatacagctaaagtatacattgagatt
caggatgaaaataatcatcccccagtgtttcagaaaaaattctacatcggaggtgtatct
gaagatgcaagaatgtttacttctgtactcaaagtgaaggctactgataaagatacgggc
aattatagtgtcatggcctacagactcataataccaccaattaaagagggaaaagaagga
tttgtagtggaaacatatacagggcttatcaaaactgctatgctcttccataatatgagg
agatcctacttcaagtttcaagttattgcaactgacgactatgggaagggactgagtggc
aaagccgatgtacttgtctctgtggtcaatcagctggatatgcaagtcattgtttccaat
gtgcctcctactctagtggaaaaaaagatagaagatctaacagagatcttggatcgctat
gttcaggaacaaattcctggtgccaaggttgtagtggagtccattggtgctcgccgacat
ggagatgccttttccctagaggattacaccaaatgtgacttgactgtctatgcaatcgac
ccccaaaccaacagagccatcgatagaaatgagctttttaaatttttggatggcaaactg
cttgatatcaataaagactttcagccgtattatggggaaggaggacgcattctggagatc
cggactccagaggcagtgaccagcattaaaaagagaggagagagtctaggatacacagaa
ggggccttgttggctctggccttcatcatcatcctctgctgcattcctgccatcttggtg
gttttggtcagctacagacagtttaaagtacgtcaagctgagtgcacaaagaccgcacga
attcaggccgcattacccgcggctaaaccagcagcgccggcccctgcaccagtggcagag
cctccgccgccgccgccgccgccgcctccaccaggtgcgcatctctatgaagaacttgga
gacagctcaatgcataagtatgaaatgcctcaatatgggagtcgccgtcgattgttacca
ccagctggacaagaggaatatggtgaggtggttggtgaagctgaggaagaatatgaggag
gaagaggaagagccaaagaaaattaaaaaaacaaaagttgaaattagagagcctagtgag
gaggaagaagtagttgtaactatcgaaaaaccaccagcagctgaacctacatacacaaca
tggaagagagccaggatatttcccatgatttttaagaaagttagaggattagctgataaa
agaggaatcgttgaacttgagggtgaagagtggcagagacgccttgaggaagacgataaa
gattatttgaaactcactctggaccaagaggaagcaacagaaagcactgtagaatcagag
gaggaatcctccagtgactatactgaatacagtgaagaagagtctgagttcagtgagtct
gagactacagaagaggaatctgagtcagagacaccctctgaggaggaggagagttctacc
cctgaatcagaagaatccgaatcgacagagtcagaaggagaaaaagcaagggaaaacatt
gtgcttgcaagaagaaggcccattgttgaggaggtcaaggaagtcaagggtaggaaagag
gagccacaagaagaacgaaaagaacctaaggtggaagaagaagaacactcagaagaagaa
gaccatggacccgtccttgtggaagaaagtacagaccttgaagctcaagatgtccctgaa
gagggcagtgcagaatcagctacggtggaaggaggtgtggaaagtgaggaggaatcagaa
tcaggtagtagtagcagtagtagcgaaagtcagtctggaggtccatggggctatcaggtg
ccagcgtatgacagaagcaagaatgcaaaccaaaagaagtcaccaggagcaaactctgaa
ggttacaacacagcactttaa
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integrated database retrieval system
