Rhinopithecus bieti (black snub-nosed monkey): 108532202
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Entry
108532202 CDS
T04641
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108532202 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rbb03041
]
108532202 (EFTUD2)
Spliceosome [BR:
rbb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108532202 (EFTUD2)
Complex C
U5 SnRNP specific factors
108532202 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
108532202
NCBI-ProteinID:
XP_017731580
UniProt:
A0A2K6MV01
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDIGDHDDDHPGLEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacttatatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgacgatgaattgggtagagagaccaaagatcttgatgagatggatgatgatgac
gatgacgatgacataggagatcatgacgatgaccaccccgggttggaggtggtgctgcat
gaggacaagaagtactacccgacagccgaggaggtgtatggccctgaggtggagaccata
gttcaagaggaagatactcagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacattacctgttacagtgtatgagatggatttcttggca
gatctgatggataactcagagctcatcagaaatgtgaccctttgtggacatctccaccat
ggcaagacgtgttttgtagattgtttaattgagcagactcacccggaaatcagaaagcgc
tatgaccaagatctgtgctatactgacatcctcttcacagagcaagagagaggtgtaggc
atcaaaagcactcctgtgacagtggtcttgccagacaccaaaggaaaatcttacctcttc
aatatcatggacactccaggacatgtgaacttctctgatgaggtcacagctggcttgcgc
atctcagatggagtggttcttttcattgatgctgccgagggggtgatgctgaacacagag
cggctgatcaagcatgcggtgcaggagaggctggcggtcactgtgtgcatcaacaagatt
gaccgactgatcctggagctgaagctgcctccaactgatgcgtattacaagctgcgccac
attgtggatgaggtcaatggattaataagcatgtattccactgatgagaacctgatcctt
tcgccactcctgggtaacgtctgcttctccagctcccagtacagcatctgcttcacactg
ggctcctttgccaagatctacgccgacacctttggtgacattaattaccaagaatttgct
aaaagactctggggtgacatctacttcaaccctaagacgcgaaagttcaccaaaaaggcc
ccaactagcagctcccagagaagtttcgtggagtttatcttggagcccctttataagatc
ctcgcccaggttgtgggtgatgtggacaccagcctcccacggaccctagatgagcttggc
atccacctgacgaaggaggagctgaagctgaatatccgccccctgctcaggctggtctgc
aaaaagttctttggcgagttcacaggctttgtggacatgtgtgtgcagcatatcccttct
ccaaaggtgggcgccaagccgaagattgagcacacctacacgggcggtgtggactccgac
ctcggcgaggctatgagtgactgtgaccctgatggccccctgatgtgccacactactaag
atgtacagcacagatgatggagtccaatttcatgcgtttggccgggtgctgagtggcacc
attcatgctgggcagcctgtgaaggtactgggggagaactacaccctggaggatgaagaa
gactcccagatatgcacagtgggccgcctttggatctctgtggccaggtaccacatcgag
gtgaaccgcgttcctgctggcaactgggttttgattgaaggtgttgatcaaccaattgtg
aagacagcaaccataacggaaccccgaggcaatgaggaggctcagattttccggcccttg
aagttcaataccacatctgttatcaagattgctgtggagccagtcaacccctcagagctg
cccaagatgcttgacggcctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaggagtctggcgagcatgtgatcctgggcactggggagctctacctggactgtgtg
atgcatgatttgcggaagatgtactcagagatagacatcaaggtggctgacccagttgtc
acgttttgtgagacggtggtggaaacatcctccctcaagtgctttgctgaaactcctaat
aagaagaacaagatcaccatgattgctgagcctcttgagaagggcctggcagaggacata
gagaatgaggtggtccagattacatggaacaggaagaagctgggagagttcttccagacc
aagtacgattgggatctactagctgcccgttccatctgggcttttggccctgatgcgact
ggccccaacattctggtggatgatactctgccctctgaggtggacaaggctcttcttggc
tcagtgaaggacagcatcgttcaaggtttccagtggggaacaagggagggccccctctgt
gatgaattgattcggaatgtcaagtttaagatcctggatgcagtggttgcccaggagccc
ctacaccggggcgggggccagatcatccccacagccaggcgagtcgtctactctgccttc
ctcatggctactcctcgtctgatggagccttactactttgtagaggtccaggcccctgca
gattgcgtctctgcagtttataccgtcctggccaggcgcagggggcacgtgactcaggat
gcacccatcccaggctcccctctgtacaccatcaaagcttttatcccagccatcgactct
tttggctttgagactgatcttcggactcacacccagggacaagccttttctctgtctgtc
ttccaccattggcagattgtgcctggtgatcctctggacaagagcattgtcatccgcccc
ttggagccacagccggctcctcacctggcccgggaattcatgatcaaaacccgccgtagg
aagggcctcagtgaagatgtgagcatcagcaaattctttgatgatcctatgttgctggag
cttgccaaacaggatgttgtgctcaattaccccatgtga
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