Rhodocyclaceae bacterium Thauera-like: B4966_07495 Help Entry B4966_07495       CDS       T05394                                  Symbol ligA Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism rbh  Rhodocyclaceae bacterium Thauera-like Pathway rbh03030   DNA replication rbh03410   Base excision repair rbh03420   Nucleotide excision repair rbh03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rbh00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     B4966_07495 (ligA)    03410 Base excision repair     B4966_07495 (ligA)    03420 Nucleotide excision repair     B4966_07495 (ligA)    03430 Mismatch repair     B4966_07495 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rbh03032]     B4966_07495 (ligA)    03400 DNA repair and recombination proteins [BR:rbh03400]     B4966_07495 (ligA) Enzymes [BR:rbh01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      B4966_07495 (ligA) DNA replication proteins [BR:rbh03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      B4966_07495 (ligA) DNA repair and recombination proteins [BR:rbh03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      B4966_07495 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      B4966_07495 (ligA)    MMR (mismatch excision repair)     DNA ligase      B4966_07495 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       B4966_07495 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH BRCT_2 5_3_exonuc Motif Other DBs NCBI-ProteinID:  AUM00021 UniProt:  A0A2K9LA87 LinkDB All DBs Position 1599396..1601477 Genome browser AA seq 693 aa AA seqDB search MNHSPQDPAGRMAWLRQTLHRYDHAYYVLDAPIVPDAEYDRLFAELQALEAQYPALASAD SPTRRVGGAPLPELAPVRHALPMLSIRTETDTSAQGVRNFDARVRNALGLTPADPPVEYL GELKFDGLAISLRYEHGVLVRAATRGDGEIGEDVTHNVRTIRQIPLQLVGAAPAVLEVRG EIYMRRDAFEALNARQRQAGEKTFVNPRNAAAGAVRQLDPRIAARRPLSFFAYGMGEQVG FDLPATQAELLERLARLGLPVCEHRCLALGPEGLIAFHARIAAIRDRLPYDIDGVVYKVN RFDLQRELGFVTREPRWAVAHKYPAQEEITRLIAIDVQVGRTGALTPVARLEPVFVGGVT VTNATLHNQDEIDRKDVRIGDWVIVRRAGDVIPEVVGPVLERRVGNPPRYRLLEAHPTCP VCGSHVVRAADEAVARCTGGLFCPAQRKQALLHFASRRAMDIEGLGDKLVDQLVDAGLVG NPADLYRLAPHTLANLERMGEKSAQKLVAAIDRSRHTTLARFIFALGIRNVGEATARDLA RHFGKLDALIAADTQTLQQVPDVGPVVAQSIATFFAEPHNREVIAQLRAAGVHWDESEPD AAPDGPLAGKTLVLTGTLPNLSREQAKALIEAAGGKVTGSVSKKTDWVVAGAEAGAKLDK AQALGVAIIDEEGLRRLLDRGGFPAMNTGEEHA NT seq 2082 nt NT seq  +upstreamnt  +downstreamnt atgaaccacagcccgcaagatccagccggacgcatggcctggctcaggcagacgttgcat cgctacgatcatgcctattacgtgctcgatgcgccgatcgtgccggatgccgagtacgat cggctctttgccgagctgcaagcactggaagcccaatatccggcgctggccagcgccgat tcgcccacccgccgggtcgggggcgcacctttgccggagttggcgccggtacgccacgcg ctgccgatgttgtccatccgcaccgaaaccgataccagtgcgcaaggtgtgcgtaacttc gatgccagggtccgcaatgccctaggtttgaccccggccgatccgccggtggagtatcta ggcgaattgaaattcgatgggctggccatcagcctgcgctatgagcacggcgtgctggtg cgggctgcaacccggggagacggcgaaattggcgaagatgtgacccataacgtgcgcacc atccgccagattcccttgcagctcgtcggtgctgcaccggctgtgctggaagtgcgtggc gagatctacatgcgccgcgatgcgttcgaagcgctcaacgcccgtcagcgtcaagccggc gaaaagactttcgtcaatccgcgcaacgcagcagccggtgcggtgcgtcagctcgatccg cgcatcgccgcccgccgcccgttgtcgttttttgcctacggcatgggcgagcaagttggc ttcgatctgccagccacccaggcggagctgctcgaacgcctggcccgcttggggttgccg gtgtgcgagcaccgctgcctggcgctcggccctgagggattgattgcctttcatgcgcgc attgccgccatccgtgaccgcttgccttacgacatcgacggcgtggtctacaaggtcaat cgtttcgatctgcaacgcgaactcggctttgtcacccgcgagccgcgctgggcggtggcg cacaagtacccggcgcaggaggaaatcacccgcctgattgccatcgacgtgcaggttggc cgcaccggtgcgctcactccggtagcgcgcctggagccggtattcgtcggcggggtcacg gtcaccaatgccacgctgcacaaccaagatgaaatcgaccgcaaggacgtacgcatcggc gactgggtgatcgtgcgcagggcaggggatgtgatccccgaagtagtcggaccggtgctc gaacgccgcgtcggcaatccgccgcgctaccgcctgctggaagcgcatccgacctgtccg gtgtgcggctcacacgtcgtgcgcgccgcggacgaagcggtagcccgttgcactggcgga ttgttctgtcccgcgcagcgcaaacaggcgctgttgcattttgcctctcggcgcgcgatg gacatcgaaggcttgggcgacaagctggtcgatcagctggtcgatgccgggctggttggc aatccggccgatctttaccggctcgcgccccatacactcgccaaccttgaacgcatggga gaaaaatccgcgcaaaaactggtggcggccatcgaccgcagccgacacaccacattggcg cgctttatctttgcgctgggcatccgcaatgtaggggaggccacggcgcgcgatctggcc cgccatttcggcaagctggacgcgctgatcgccgccgatacgcagaccttgcagcaggtg ccggatgtggggccggtggtcgcgcaatcgattgccactttttttgccgaacctcataac cgcgaagtcatcgcgcaattgcgcgccgcaggcgtgcactgggatgagtccgaaccggac gcggcgcccgatgggccgcttgccggcaagaccttggtgctgaccggcacactgccgaat ctgagccgcgaacaggccaaagccttgatcgaagcggccggcggcaaggtgaccggctca gtgtcgaagaaaaccgactgggtggtggccggtgccgaggcgggcgccaaattggacaaa gctcaggcactgggcgtggccatcatcgatgaagaaggactgcgccgactgctggaccgc gggggttttcccgcaatgaacacaggagaagaacacgcatga

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