Robiginitalea biformata: RB2501_03905
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Entry
RB2501_03905 CDS
T00992
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi00020
Citrate cycle (TCA cycle)
rbi00785
Lipoic acid metabolism
rbi01100
Metabolic pathways
rbi01110
Biosynthesis of secondary metabolites
rbi01120
Microbial metabolism in diverse environments
rbi01200
Carbon metabolism
rbi01210
2-Oxocarboxylic acid metabolism
Module
rbi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rbi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RB2501_03905
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RB2501_03905
Enzymes [BR:
rbi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RB2501_03905
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Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Frankia_peptide
Cdh1_DBD_1
Terminase-T7_RNaseH-like
Motif
Other DBs
NCBI-ProteinID:
EAR16009
UniProt:
A4CGF1
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All DBs
Position
complement(149286..152108)
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AA seq
940 aa
AA seq
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MDRYSFLNAAHTAFFSDLYDRYLTHPDSVEPSWRAFFQGFDFGMESALEEIGIDAEAGVV
RTAGGDEAAMPLSLKKEFQVVRLIDGYRSRGHLFTQTNPVRERRTYTPSLEIENFGLEES
DLEKVFSAGDIIGIGPSTLREIIDHLTRIYCDAIGVEYMYIRSPERVEWIQQWLNVNDNH
PNFSPERKKYILRKLNEAVSFEGFLHTKYVGQKRFSLEGNESLIPAVDAIVERAAELGVQ
QFVMGMAHRGRLNVLTNIFGKPATDIFSEFEGKDYEQEIFDGDVKYHLGWTSMRKTNSGD
SINMNIAPNPSHLETVGAVVEGITRAKQDRHFPEDFSKVLPIVVHGDAAIAGQGIAYEVV
QMAGLDGYGTAGTIHIVVNNQIGFTTNYLDGRTSTYCTDVGKVTLSPVLHINADDAEAVV
HAALFALEYRMKFRRDVFLDLLGYRKYGHNEGDEPRFTQPKLYKAIAKHQNPRDIYAERL
MSEGVIDADFVKKLEEDYKAKLEEELRDSKKEDKTRITAFMADEWDGFENVREWEMMEPV
ETGVPKDKLEAVARVITQLPEDKKFLRKVDKLVKERHKMFFETNRLDWAMGELLAYGTLL
QEGFDVRISGQDVERGTFSHRHAVMKVEESEEEVLLLNHISEEQGDFQIYNSLLSEYGVV
GFEYGYAMASPNTLTIWEAQFGDFSNGAQIMIDQYLSAAEDKWKLQNGLVLFLPHGYEGQ
GAEHSSARMERYLQLCARDNMYVADVSTPANLFHLLRRQMLVNFRKPLVVFTPKSLLRHA
KCVSTVEELAEGRFQEVIDDAGASVKKVKSLVFCTGKFYYDLLAAREELGREDVALVRLE
QLFPLPVVQMEELIEKYSHAEDLVWAQEEPRNMGAWSHLMMHFPDASRFRVASRRFYASP
AAGSPARSKMRHQQVIDYVFDPKKDNMSRPVPADVATDEE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggatagatattccttcttaaacgcggctcataccgcttttttttcagacctatacgat
cggtacctcacccacccggacagtgttgagcccagttggcgcgcatttttccagggattt
gatttcgggatggaaagcgccctggaggaaatcggcatcgatgcggaggccggggtggtg
cgcacggccggaggggatgaagcggccatgccgctctcgctcaaaaaagaattccaggtg
gtgcggctcatcgacgggtaccgcagccgcgggcacctgtttacccaaacgaacccggta
agggagcggcgcacctatacgccttccctggaaatcgaaaatttcggattggaggaatcc
gacctggagaaggtgttcagcgcgggggatatcattgggatcggcccgagcacgctgcgg
gagatcatcgaccacctcacgcggatctactgcgacgccatcggcgtggaatacatgtat
atccgcagcccggagcgggtagagtggatccagcagtggctcaacgtcaatgacaaccac
ccgaatttcagcccggaacgaaaaaaatacatcctccgcaaactcaatgaggcggtttcc
tttgaaggcttcctccacacaaaatacgtcggccagaaacgtttttccctggaagggaat
gaatcgctgatcccggcggtggacgccatcgtggagcgggcagccgaactgggcgtccaa
cagtttgtcatgggaatggcccaccggggccgcctgaatgtactcacaaatattttcggg
aaacccgcaaccgatatcttcagcgaattcgaaggcaaggactacgaacaggaaattttt
gacggggacgtgaaataccacctggggtggacctccatgcggaagacgaattccggggat
agcatcaatatgaacattgcgcccaacccctcccacctggaaacggttggggcggtggtt
gaagggattacccgggccaaacaggaccggcacttccccgaggatttttccaaggtcctg
ccaatcgtggtccacggggacgccgccatcgccggccagggcattgcctacgaggtggta
cagatggccggcctggacgggtacggcacggccggtacgatccacattgtggtcaataac
cagatcggctttaccacgaattatctggacgggcgtacctccacgtactgcacggacgtg
gggaaggtgaccctgagcccggtactccacatcaatgcggacgatgcggaagccgttgtg
cacgctgccctctttgccctggaataccggatgaaattcaggcgggatgtattcctggac
ctgttgggttaccgcaaatacggccacaacgaaggggatgagccgcggtttacgcagccc
aagctctacaaggccatcgccaagcaccaaaacccccgggatatttatgcggaacggctg
atgtccgaaggcgttatcgatgcggactttgtcaaaaagctggaagaggactacaaagcg
aagctggaggaagaactccgggacagcaagaaggaagataaaacgcggattaccgccttt
atggccgacgaatgggacgggtttgaaaatgtccgggaatgggaaatgatggagccggtg
gaaacaggggtcccgaaggacaagctggaagcggttgcccgggtgattacccaactcccg
gaagacaaaaaattcctgcgcaaggtagacaagctcgtcaaggagcgccacaagatgttc
tttgaaaccaaccgcctggattgggccatgggggagttgctcgcctatggcacgctcctg
caggagggattcgacgtgcggatttccgggcaggacgtggagcgggggacattctcccac
cgccacgcggtgatgaaggtggaagaaagcgaggaagaggtcttgctgctgaaccatatc
tcggaggaacagggcgatttccagatctacaattccctgctttccgagtacggggtggtt
ggattcgaatacgggtacgccatggcgagcccgaacacgctcaccatatgggaagcccag
ttcggggatttcagcaacggcgcccagatcatgatcgaccagtatctctcggcagcggaa
gacaaatggaagttgcagaacggcctggtgcttttcctgccccacggctatgaaggccag
ggtgcggaacactcttcggcccggatggagcgctacctgcaattgtgcgcccgggacaat
atgtatgtggctgatgtcagtaccccggccaacctgtttcacctgctccggcgccagatg
ctggtcaacttccgcaaaccgctggtggttttcaccccgaagagcctgctccggcatgca
aaatgcgtctccacggtagaggaacttgcggaaggccggttccaggaagtgatcgacgat
gccggggcatcggttaaaaaggtcaaatccctggtattctgtacggggaaattttattac
gacctgctcgcagcccgggaggaactgggcagggaggatgtggccctggtccgcctggaa
caattgttcccgctgccggtggtgcagatggaggagcttatcgagaaatattcccatgcg
gaagacctggtttgggcacaggaggaacccaggaacatgggtgcctggagccacctgatg
atgcacttcccggatgcctcgcgtttccgcgtggcttcgcggcgcttttacgcttccccg
gcagcgggcagcccggcgcgctccaagatgcggcaccagcaggtaatcgattatgttttc
gatccgaaaaaagacaatatgagccggccggttcctgcggatgtggcaacggacgaagaa
tga
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