Rhodopseudomonas boonkerdii: E0H22_01495
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Entry
E0H22_01495 CDS
T07799
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E0H22_01495 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbk03400
]
E0H22_01495 (nth)
Enzymes [BR:
rbk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E0H22_01495 (nth)
DNA repair and recombination proteins [BR:
rbk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E0H22_01495 (nth)
Prokaryotic type
E0H22_01495 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HTH_Tnp_Tc3_2
PsbU
Motif
Other DBs
NCBI-ProteinID:
UGV28766
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All DBs
Position
322545..323345
Genome browser
AA seq
266 aa
AA seq
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MPKITRQPPARAKTSIAKAAVAKKTSAKVRVVKKAVKPKTAKPKSSKPKPIKFKPWTAAE
IHEAFSRFRKANPEPKGELEHLNPYTLLVAVVLSAQATDAGVNKATRALFPIADTPQKMI
DLGEETVRDYIKTIGLYRTKAKNVIALSEKLIRDFGGVVPRTRAEIESLPGAGRKTANVV
LNMAFGEHTMAVDTHVFRVGNRTGLAPGKTVLDVELELERVIPSEFMLHAHHWLILHGRY
TCLARKPRCELCLINDLCRWPEKTVA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaatcacccgccagcctcccgcccgcgcgaagacctccattgcaaaagccgcc
gtggcgaagaagacgtcagcgaaggtcagggtagtcaagaaggcagtcaaaccgaagacc
gccaagcctaagtcctccaagcccaagcccatcaagtttaaaccttggacggcggccgag
atacacgaagcgttctcgcggttccgcaaggccaatcccgaacccaagggcgagctcgaa
catctcaatccctacacgctgctggtcgccgtggtcctatccgcgcaggcgaccgatgcc
ggcgtcaacaaggcgacgcgtgcgctgtttcccatcgccgatacgccacagaagatgatc
gatctcggcgaggagacggtccgcgactatatcaagaccatcggcctctatcggaccaag
gcgaaaaacgtcatcgccctgtcggaaaagctgatccgcgattttggcggtgtcgtgccg
cgcacccgcgcggagatcgaatcgctgcccggcgctggacgcaagacggccaatgtcgtg
ctcaacatggcatttggcgaacatacgatggcggtggacacccatgtgttccgcgtcggc
aaccgcacgggccttgcgccgggcaagaccgtgctcgatgtcgagctcgaactcgaacgc
gtgatcccgtccgaattcatgctgcacgctcatcactggctgatcctgcacgggcgctac
acctgcctcgcgcgaaagccgcgctgcgaactgtgcttgatcaacgatctttgccgctgg
ccggaaaagacggtcgcgtag
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