Rhodopseudomonas boonkerdii: E0H22_07605
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Entry
E0H22_07605 CDS
T07799
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk01501
beta-Lactam resistance
rbk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E0H22_07605
01503 Cationic antimicrobial peptide (CAMP) resistance
E0H22_07605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbk02000
]
E0H22_07605
01504 Antimicrobial resistance genes [BR:
rbk01504
]
E0H22_07605
Transporters [BR:
rbk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E0H22_07605
Antimicrobial resistance genes [BR:
rbk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E0H22_07605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
AP3B1_C
Motif
Other DBs
NCBI-ProteinID:
UGV25570
LinkDB
All DBs
Position
1638669..1641830
Genome browser
AA seq
1053 aa
AA seq
DB search
MSHFFIKRPIFAWVLAILIMFGGVLAIFKLPIAQYPQIAPTVITITANYPGANATTAENS
VTKVIEQNMTGVDYLQYMSSYSTSTGVVQISITFTNEANADIAQVQVQNKLQLAMPLLPQ
VVQQQGIRVVKSSSSFLMVLGFVSEDGSMNASDIADYVASTINEPISRVSGVGQVQLFGA
EYAMRIWLDADKLTKYNLMPSDVTQAIQAQNTQVTAGQLGGLPAVDGQQLNATITSQSRL
QTIEQFQDIILRTSTSGQTVRIKDVARVELGSKSYDAVARYNAKPAAGMGISLATGANAV
ATSEGVKARINQLTANMPAGLKVIYPYDTTPFVKLSIEKVVHTLFEAVVLVFLVMFLFLQ
SWRATIIPTIAVPVVLLGTFGILSIAGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
EEEGLSPREATEKSMNEITGALVGIGVVLSAVFIPMAFFSGSVGIIYRQFALTIVSAMVL
SVLVALILTPALCATILKKPEKGHHEKRGFFGWFNRNFDRTSRGYQSTTGRFVKRPAGTL
LAFVAVVVGMVFLFVRLPSSFLPDEDQGTIITLVQLPVGATAGRTLDVIKQVEHQYMENE
KDAVQGVFAVRGFSFAGQGQNVGLAFVSLKPFAQREDHEKSAQAVARRAMGAFSKIRDAM
AFAVLPPSLPGFGNASGFDFYLQDSGNAGHEELLKTRNQLLGALSGDPRVAQARPNGQDD
TPQFNLDIDQAKATALGVNLNDLNTTLSAAWGGAYVNDFIDRGRVKQVYVQGDAAFRMDT
NDIGKWYVRNSSGAMVPFSAFATSRWSYGSPRLERYNGVAAVQIQGQASPGTSSGTAMLA
VDEQMKKLPAGYTHEWTGLSFQERLTGSQTLYLYAISVLIVFLSLAALYESWSIPFAVML
SVPIGILGALGAATLFGQNNDVYFQVGLLTTIGLSAKNAILIVEFAIEQQQKGLSLIEAT
LHAARQRLRPILMTSMAFVLGVLPLALATGAGSASQNAIGIGVAGGMVTATVLGVFFVPV
LYVLVRKVFPGGSKSTSASSAHPAATPAATPAE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcttcatcaagcggccgatcttcgcctgggtcctggcgatcctgatcatg
ttcggcggcgtgctggcgatcttcaagctgccgatcgcccagtatccgcagatcgcgccg
acggtgattaccatcaccgcgaattatccgggcgcgaatgcgaccacggctgagaactcg
gtgaccaaggtcatcgagcagaacatgaccggcgtcgattatctgcaatacatgtcgtcc
tattcgacctcgaccggcgtggtgcagatctccatcaccttcaccaacgaggcgaatgcc
gacatcgcgcaggtgcaggtgcagaacaagctgcagctcgcgatgccgctgttgccgcag
gtggtgcagcagcagggcatccgcgtggtcaagtcgtcgtcgagcttcctgatggtgctc
ggcttcgtctccgaagacggctcgatgaatgccagcgacatcgccgattacgtggcaagc
acgatcaacgagccgatcagccgtgtctccggcgtcggccaggtgcagctgttcggtgcc
gaatatgccatgcgcatctggctcgatgccgacaagctgaccaaatacaatctgatgccg
agcgacgtcacgcaggcgatccaggcgcagaacacgcaggtgaccgcgggccagctcggc
gggttgccggcggtggacgggcagcagctcaacgccaccatcacgtcgcaaagccgtttg
cagaccatcgagcagttccaggacatcatcctgcggacttcgacgtccggccagaccgtg
cgcatcaaggatgtggcgcgggtcgagctcggttcgaagagctatgacgcggtggcgcgt
tacaacgccaagccggcggccggcatgggcatcagtcttgcgaccggcgccaatgcggtc
gcgacctcggaaggcgtgaaggcgcggatcaatcagctcacggcgaacatgccggcggga
ctgaaggtgatctatccctacgacaccacgcccttcgtgaagctttccatcgagaaggtc
gtgcacacgctgttcgaagccgtggtgctggtcttcctggtgatgttcctgttcctgcag
agctggcgtgcgaccatcattccgaccatcgcggtgccggtggtgctgctcggcaccttc
ggcatcctctcgatcgcggggtactccatcaacacgttgaccatgttcgccatggtgctg
gccatcggcctgctcgtcgacgacgccatcgtcgtggtggaaaacgtcgagcgcgtgatg
gaggaggagggactgtcgccacgcgaggcgaccgagaaatccatgaacgaaatcaccggc
gcgctggtcggcatcggtgtcgtgctctccgccgtgttcattccgatggcgttcttctcg
ggctcggtgggcatcatttatcggcaattcgccttgaccatcgtatccgcgatggtgctc
tcggtgctggtggcgctgatcctgacgccggcgctctgcgcgacgattttgaagaagccg
gaaaaaggccatcacgagaagcgcggcttctttggctggttcaatcgcaatttcgatcgg
acctcgcgtggctatcagtcgaccaccggccgcttcgtcaagcgacctgcaggtacgctg
ctggctttcgtcgctgtggtcgtcggcatggtgttcctgttcgtgcggctgccgtcgtcg
ttcctgcccgacgaagaccagggcacgatcatcacgctggtgcagttgccggtcggcgcc
acggccggtcggacgttggatgtgatcaagcaggtcgagcatcagtatatggagaacgag
aaggacgccgtgcagggcgtgttcgccgtgcggggcttctcctttgccggccagggccag
aatgtcggcctcgctttcgtcagcctgaagccgttcgcgcagcgtgaagatcacgagaaa
tccgcgcaggccgtggcgcggcgcgcgatgggcgcattctcgaagatccgcgatgcgatg
gccttcgcggtgctgccgccgtcattgccgggtttcggtaacgcctcgggcttcgacttc
tatctgcaggatagcggtaatgccggccacgaggagctgttgaagacgcgcaatcagttg
ctgggtgccctcagcggcgatccgcgggtcgcgcaggcgcggcccaatggtcaggacgat
acgccgcaattcaacctcgatatcgatcaggccaaggcgacggcactgggcgtcaacctg
aacgatctcaacacgacgctctcggcagcgtggggcggcgcctatgtgaacgacttcatc
gatcgcggccgcgtcaagcaggtctatgtgcagggcgatgccgccttccgcatggatacc
aatgacatcggtaaatggtatgtccgcaactcgtcgggcgcgatggtgccgttctcggct
tttgccaccagccgctggagctacggttcgcctcgcctggaacgctacaatggtgtcgcg
gccgtacagatccagggccaggcctcaccgggcacgagctccggtacggcgatgctggcg
gtggacgagcagatgaagaaactgccggccggctatacgcatgaatggacaggcctgtcg
ttccaggaacgccttaccggtagccagacgctgtatctctatgcgatctcggtgctgatc
gtgttcctcagcctggcggcgctctatgagagctggtcgatcccgttcgccgtcatgctg
tcggtgccgatcggtattctcggcgcgctcggtgccgcgaccttgttcgggcagaataac
gacgtctatttccaggtcggcctgctcaccaccatcggcctgtcggcgaagaacgcgatc
ctgattgtcgaattcgccatcgagcagcagcagaagggactgtccttgatcgaggcgacg
ttgcacgctgcgcggcagcgcctgcggccgatcctgatgacctcaatggctttcgtgctc
ggcgtgctgccgctggcgctcgccacgggggccggctcggcaagccagaacgccatcggt
atcggcgtcgccggcggcatggtgacggccacggtgctcggcgtgttcttcgtgccagtg
ctctatgtgctggtgcgcaaggtttttccgggtggttccaagtccacaagtgcgtcaagc
gcacatccggcagccactccggcagccactccggcagagtga
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