Rhodopseudomonas boonkerdii: E0H22_15795
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Entry
E0H22_15795 CDS
T07799
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk01501
beta-Lactam resistance
rbk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E0H22_15795
01503 Cationic antimicrobial peptide (CAMP) resistance
E0H22_15795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbk02000
]
E0H22_15795
01504 Antimicrobial resistance genes [BR:
rbk01504
]
E0H22_15795
Transporters [BR:
rbk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E0H22_15795
Antimicrobial resistance genes [BR:
rbk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E0H22_15795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
UGV27023
LinkDB
All DBs
Position
complement(3479342..3482485)
Genome browser
AA seq
1047 aa
AA seq
DB search
MSNFFIARPIFAWVVAIFIMIAGALAIPSLPVAQYPDIAPPRIAISTNYPGASSEEIYQG
VTRLIEDQLNGIPGLMYFESTADATGAIQIDVTFRPGTSVAQATVDVQNRIRRVESRLPR
AVTQQGIIVEEGSIAFLLFISMQTTDGSMDSIALGDYITRNVLSEIRRVPGVGKAQLFGT
QRSMRVWIDPDKMLGLGLTASDITAAITAQNAQVAAGRIGAQPNPVSQEVTAPVLVKGQL
GTPDEFGAIVLRANRDGSSVRLRDVARVEVGGEDYNFASRLNGKPAAAIGVQMSATGNAM
ATSEAVNAKMKELSKFFPKGLTYEIPYDTTPFVKASIEKVLHTLAEAIGLVFIVMFLFLQ
NIRYTLIPTIVVPIALLGTCAVMFATGFSINVLTMFAMVLAIGILVDDAIVVVENVERLM
AQEGLSPREATVKAMRQISGAIVGITLVLTAVFVPMAFFPGAVGIIYRQFSLTMVVSILF
SGFLALTLTPALCATFLKPIPHGHHEKGGFFGWFNRSFDRLAGSYRGTVGWITSRTGRMM
AIYLALLVGLGWAYIRLPTGFLPTEDQGYVIVDVQAPPEASQSRTLDSMKQIEDVFLKEK
GVASVFSVLGFSFSGNGQSSGIAWPTLKDWSDRGRQDAAPEIVNRANAEFAKIGDAQAFA
LSPPPIEGLGNSTGFSFRLQDRSSRGSAALTAAANQLMAEGAKSPVLTGLRVEGLSNSAQ
LNLVIDREKANTFGVSFTDINTTISASLGSAYVNDFPNTGRMQRVTVQAEGTRRMQADDL
LKLNVRNASGGMVPLSAFARTEWAKGPVQVVGFNGYPSIRIAGDAAPGYSSGDAIKEMER
LVTRLPDGFGYQWAGQSQQEIESGNQAPFLLGLSVLFVFLLLAALYESWSIPLSVMLVVP
LGIIGSLLAVMLRDMPNDIYFKVGLIAIIGLSAKNAILIVEFAKELHAEGKSLRDAAIEA
AFIRFRPILMTSLAFILGVTPLAVATGASAGSQNAIGTGVLGGMISATVLAVLFVPVFYV
FVLKRMPSKRKRQQADVGSHDAASRLT
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacttcttcatcgcgcgccccatctttgcctgggtggtcgccatcttcatcatg
attgccggtgcgctggcgatcccctcgctgccggttgcgcagtatccggacatcgcgccg
ccacgcatcgcgatctccaccaattatcccggcgcatcgtcggaagagatctatcagggc
gtgacgcggctgatcgaggatcagctcaacggcattcccggcctgatgtatttcgagtcc
accgcggacgcgactggcgcgatccagatcgacgtcacgttccggcctggcacgtcggtg
gcgcaggcgacggtggacgtacagaaccgtatccgccgcgtggaatcgcggctgccgcgt
gcggtgactcagcaaggcattatcgtcgaggaaggctcgatcgcgttcctgctcttcatc
tccatgcagaccaccgatggcagcatggatagtattgcgcttggcgactacatcacccgc
aatgtgctcagcgaaatccggcgggtgcccggtgtcggtaaggcgcagctgttcggcaca
cagcgctcgatgcgcgtctggatcgatcccgacaagatgctcggcctcggtctcacggcg
tcggacatcacagcggcaatcaccgcacaaaacgcccaggtcgcggccggtcgcatcggg
gcacagcccaatcccgtctcgcaggaggtcaccgcgcccgtcctggtcaaaggccagctt
ggaacgccggatgaattcggcgcaatcgtgctgcgtgccaatcgcgacggttcatcggtg
cgtttgcgcgatgtcgctcgcgtcgaggtgggcggcgaggactataattttgccagccgc
ctgaacggcaagccggcggccgccatcggtgtgcagatgtcggcaaccggaaatgcaatg
gcgacgtcggaggcggttaacgccaagatgaaggagctgtcaaagttcttcccgaagggg
ctgacctacgaaatcccctatgacaccacgccattcgtgaaagcgtccatcgaaaaggtg
ctgcacacgcttgccgaggcgatcggcctcgtcttcatcgtgatgttccttttcctgcag
aacatccgctacacgctgatcccgacgatcgtggtgcccatcgccttgctcggcacgtgc
gccgtgatgttcgcgacgggtttctccatcaatgtgctcaccatgttcgccatggtgctg
gccatcggtattcttgtcgatgacgccatcgtggtggtcgagaatgttgagcgcctgatg
gcgcaggaaggcctgtcgccgcgcgaggcgaccgtgaaagcgatgaggcagatcagcgga
gccatcgtggggatcacgctggtgctcacggccgtgttcgtgccgatggcattcttcccg
ggggcggtcggcatcatctatcgacaattcagtctcaccatggtggtgtcgatcctgttc
tcgggattcctggcgctcacgctgacgcctgcattgtgcgcgactttcctgaagccgatc
ccgcatgggcatcatgagaagggcggcttcttcggctggttcaatcgcagcttcgaccgt
ctcgccgggagctatcgtggcacggtcggctggatcaccagccgcaccggccggatgatg
gcgatctatcttgcactactggtcgggctcggctgggcctatatccggctgccgaccggc
tttctgccgacggaagatcagggctatgtgatcgtcgacgtgcaggcgccgccggaggcg
agccagtcgcggacgctcgactcgatgaaacagatcgaggacgtcttcctgaaggagaag
ggggtcgccagcgtcttctccgtgctcggcttcagcttctccggcaatgggcagagttcg
ggcattgcatggccgacattgaaggactggagcgatcgcggcaggcaggatgcggcgcct
gagatcgtcaatcgcgccaatgcggaattcgccaagattggcgatgcacaggctttcgcg
ctgtcgccgccgccgatcgaaggtctcggcaattcgaccggcttcagcttccgtctgcag
gaccgcagcagccgtggttcggctgcactgacggccgccgctaaccaattgatggccgaa
ggcgcgaagagcccggtgctcaccggtctgcgcgtcgaggggctgtcgaattccgcgcag
ctcaatctcgtcatcgatcgcgagaaggcgaatacgtttggcgtctccttcaccgatatc
aacacgacaatttcggcgagcctcggctcggcctatgtcaacgacttccccaataccggc
cgcatgcaacgcgtcaccgtacaggcggagggcacgcgccgcatgcaggcggacgatctc
ctgaagctcaatgtccgcaatgccagcggcggtatggtgccgctctcggcctttgcccgc
accgaatgggccaagggacctgtgcaggtggtcggcttcaacggttatccgtcgatccgt
atcgccggagacgccgcgccgggttactcgtccggcgatgccatcaaggagatggaaagg
ctagtcacgcggttgcccgatggcttcggctatcaatgggcggggcagtcgcagcaggaa
atcgagtctggcaaccaggcgccgtttctgctggggctgagtgtgctgttcgtgttcctg
ctgctcgccgctctctatgagagctggtcgattccgctgtcggtgatgctggtggtgccg
cttggtatcatcggttcgttgctcgccgttatgctgcgcgacatgccgaatgacatctat
ttcaaggtcggcttgatcgcgatcatcggcctgtccgcgaagaacgcgatcctgatcgtg
gaattcgccaaggaattgcatgcggaaggcaagtcgttgcgcgacgcggctatcgaggcg
gccttcatccggttccggccgatcctgatgacgtcgcttgccttcattctcggcgtcacc
ccgctggcagttgcgacgggtgcgagcgccggcagccagaacgccatcggcaccggcgtg
ctcggcggcatgatctccgccaccgtcctcgcggtgctgttcgtgccggtgttctatgtg
ttcgtcctgaagcggatgccctcgaaacgaaagcgacagcaggcagacgtcggctctcac
gacgcagcgtcgcggctgacatag
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