Rhodopseudomonas boonkerdii: E0H22_21020
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Entry
E0H22_21020 CDS
T07799
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk01501
beta-Lactam resistance
rbk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E0H22_21020
01503 Cationic antimicrobial peptide (CAMP) resistance
E0H22_21020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rbk03036
]
E0H22_21020
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbk02000
]
E0H22_21020
01504 Antimicrobial resistance genes [BR:
rbk01504
]
E0H22_21020
Chromosome and associated proteins [BR:
rbk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
E0H22_21020
Transporters [BR:
rbk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E0H22_21020
Antimicrobial resistance genes [BR:
rbk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E0H22_21020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
UGV27941
LinkDB
All DBs
Position
complement(4621219..4622433)
Genome browser
AA seq
404 aa
AA seq
DB search
MTIINARAAGFALLLAGLAPVLAGCNEPKDAVAAAPAEDPAPEVSVVTVRQQARAIVREL
PGRIAPTRVADVRSRVSGIIIERAFHQGTEVKAGDTLYRIDPKPFEVELQAAKASLHKAE
AAHDLATLQAKRISGLAQQKAVSEAEGERAIGAQRQAEAEIAARKADVARARLNLDYATI
RAPIDGIVGAALVTEGTLIAQNDTTNLATIQQLDPIYADFTQSVSELNSLRRAFETGDLE
RIAPDAAKVRLVFDDGSIYPLVGKLLFSEAKVDTFTGQVTLRGEFPNPNRELLPGMYVRV
QIEQGIDTDAIAVPQQAVQRNGGGGAEVFVVKSDGHVAVQAVKTGAVQDGLWLVMEGLKG
GEQIVVEGFQKFSAGDKVKTVKWTDPSLAAQFSGDGQKTTQARP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcatcaatgcacgtgctgcaggcttcgcgcttctgctggcagggctggcgcct
gtgctggcgggatgcaacgaaccgaaggatgcagtcgcggcggcgccggcagaagatccg
gcgcctgaggtgagcgtcgtcactgtcaggcagcaggcccgcgccatcgtccgcgaactg
ccgggccgtatcgcgcccacgcgcgtcgccgatgtgcgttcgcgcgtgtccggcatcatc
atcgagcgcgcctttcatcagggcaccgaggtgaaggccggcgacacgctttaccggatc
gatcccaagccgttcgaagtggaattgcaggcggccaaggcgtcgctgcacaaggccgaa
gcggcccatgacctcgcgacgctgcaggcgaagcgtatctccggcctcgcgcagcagaag
gccgtgtccgaggccgaaggcgagcgcgccatcggcgcccagcgccaggctgaagctgag
atcgccgcgcgcaaggctgacgtcgcccgcgcccgtctcaatctcgactatgcgacgatt
cgcgcgcccatcgacggcattgtcggcgccgcgctggtgaccgaaggcacgctgatcgcc
cagaacgacaccaccaacctcgccaccatccagcagctcgacccgatttatgccgacttc
acccagtcggtgtcggagctgaactcgctgcgccgtgctttcgagaccggcgatctcgag
cgcatcgcgccggatgccgccaaggtgcgtctcgtgttcgacgatggctcgatctatccg
ctggtcggcaagctgctgttctcggaggccaaggtcgataccttcaccgggcaggtgacg
ctgcgcggcgagttcccgaatccgaaccgtgagctgctgccgggcatgtatgtccgcgtg
cagatcgagcagggcattgacaccgacgccatcgcagttccgcagcaggcggtccagcgc
aatggcggcggtggcgccgaggtgttcgtggtgaagagcgacggccatgtcgccgtgcag
gcggtgaagaccggtgccgtgcaggacggtctgtggctggtgatggaaggtctcaagggc
ggcgagcagatcgtcgtcgaaggtttccagaagttctccgccggcgacaaggtgaagacc
gtgaagtggaccgatccgagccttgcggcgcagttttcaggcgatggccagaagacgacg
caagcgcggccctga
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