Rubrivivax benzoatilyticus: RBXJA2T_09000 Help Entry RBXJA2T_09000     CDS       T04092                                  Name (GenBank) DNA ligase (NAD+)   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism rbn  Rubrivivax benzoatilyticus Pathway rbn03030   DNA replication rbn03410   Base excision repair rbn03420   Nucleotide excision repair rbn03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rbn00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     RBXJA2T_09000    03410 Base excision repair     RBXJA2T_09000    03420 Nucleotide excision repair     RBXJA2T_09000    03430 Mismatch repair     RBXJA2T_09000  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rbn03032]     RBXJA2T_09000    03400 DNA repair and recombination proteins [BR:rbn03400]     RBXJA2T_09000 Enzymes [BR:rbn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      RBXJA2T_09000 DNA replication proteins [BR:rbn03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      RBXJA2T_09000 DNA repair and recombination proteins [BR:rbn03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      RBXJA2T_09000    NER (nucleotide excision repair)     GGR (global genome repair) factors      RBXJA2T_09000    MMR (mismatch excision repair)     DNA ligase      RBXJA2T_09000   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       RBXJA2T_09000 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH BRCT_2 Nlig-Ia DUF4796_N Motif Other DBs NCBI-ProteinID:  EGJ10452 LinkDB All DBs AA seq 686 aa AA seqDB search MSPTSAAERAAELRRILSHHAHRYYVLDAPEIPDAEYDRLFQELQAIESEHPDLLTPDSP TQRIIGQVLPGLVPVRHAVAMLSIRTETDTTAAGAEAFDARVRRELELGDDAPPVEYAAE LKFDGLAINLRYVAGLLVQAATRGDGETGEDVTHNIRTIGQIPLRLFGTAPPVLEVRGEV YMRRDDFERLNERQREKGAKTFINPRNTAAGAVRQLDSRSLADKRLSFYAYGLGEVQGWE QPPTHSGTLDALAAFGLPVNGERAVVQGADGLVAFHRRIAAARDALPFDIDGVVYKVNDI ALQKRLGFVTREPRWAVAHKYPAQEQMTRLNAIEIQVGRTGKLTPVAKLEPVFVGGTTVS NATLHNLFELRRKGVRVGDDVIVRRAGDVIPEVVGRVPGERAGYVPNFRMPRQCPVCGSA VARERGGIDHRCSGGLFCAAQRKQALLHFAGRRAMDIEGLGDKLVDQLVDGGLIRTLPEL YTLGVAKLSALERMAEKSAANLVAALDRSKQTTLARFLYALGIRQVGEATAKDLARHFGG LDRVMDASVEQLLEVRDVGPIVAQSIRTFFEQPHNREVVEQLRAAGIRWDEHEGAAVANA AALPLAGKTLVLTGTLPTLSREQAKEMIEAAGGKVAGSVSKKTHYVVAGEEAGSKLDKAR ELGIEVLDEDGLRRLLQPTDGAAAGS NT seq 2061 nt NT seq  +upstreamnt  +downstreamnt atgtccccgacgtctgccgccgagcgcgccgccgagctgcgccgcatcctctcgcaccac gcccaccgctactacgtgctcgacgcgccggagatccccgacgccgagtacgaccgcctg ttccaggaactgcaggcgatcgaatccgaacatcccgatctgctgacgcccgactcgccg acgcagcgcatcatcggccaggtgctgcccgggctggtgccggtgcgccatgcggtggct atgctgtcgatccgcaccgagaccgacaccacggccgccggtgccgaggcgttcgatgcg cgtgtgcgccgcgagctggaactgggcgatgacgcgccgccggtcgaatacgccgccgag ctgaagttcgacggcctggcgatcaacctgcgctacgtcgccggcctgctggtgcaggcc gcgacccgtggcgacggcgagaccggcgaggacgtcacgcacaacatccgcacgatcggg caaatcccgctgcgcctgttcggcaccgcgccgccggtgctggaggtgcgcggcgaggtc tacatgcggcgcgacgacttcgagcgcctgaacgagcgccagcgcgagaagggcgccaag accttcatcaacccgcgcaacaccgccgccggtgcggtgcgccagctcgacagccgctcg ctggccgacaagcgcctgagcttctacgcctacggtctgggcgaggtgcagggctgggag caaccacccacgcacagcggcacgctggacgcactggccgccttcggcctgccggtcaac ggcgagcgcgccgtggtgcagggcgccgacggcctcgtcgccttccaccggcgcatcgcg gcggcgcgcgacgcgctgcccttcgacatcgacggcgtcgtctacaaggtcaacgacatc gcgctgcagaagcgcctgggtttcgtcacccgcgagccgcgctgggcggtggcgcacaag tacccggcgcaggagcagatgacgcggctcaacgccatcgagatccaggtcggccgcacc ggcaagctgacaccggtggccaagctggagccggtcttcgtcggcggcacgacggtcagc aacgcgacgctgcacaacctgttcgagctgcggcgcaagggcgtgcgcgtcggcgacgac gtcatcgtgcgccgcgccggcgacgtgatccccgaagtcgtcggccgcgtgccgggcgaa cgtgccggctacgtgcccaacttccgcatgccgcgccagtgcccggtctgcggcagcgcc gtcgcccgcgagcgcggcggcatcgaccaccgctgcagcggcggcctgttctgcgccgcg cagcgcaagcaggcgctgctgcacttcgccggccggcgtgcgatggacatcgagggcctg ggcgacaagctcgtcgaccagctcgtcgacggcggcctgatccgcacgctgcccgagctg tacacgctgggcgtggccaagctctcggcgctggagcgcatggccgagaagagcgccgcc aacctcgtcgccgcgctggacaggagcaagcagacgacgctggcgcgtttcctctacgcg ctgggcatccgtcaggtcggcgaggccaccgccaaggacctggcacgccacttcggcggc ctggaccgcgtgatggacgccagcgtcgagcagctgctggaagtgcgcgacgtcggcccg atcgtcgcgcagagcatccgcaccttcttcgagcagccgcacaaccgcgaggtcgtcgag cagctgcgggccgccggtatccgctgggacgagcacgagggcgcggccgtcgccaacgcc gcggcgctgccgctggccggcaagacgctggtgctgaccggcacgctgccgacgctttcg cgcgagcaggccaaggagatgatcgaggccgccggcggcaaggttgccggctcggtgtcg aagaagacgcactacgtcgtcgccggcgaggaagccggcagcaagctggacaaggcgcgc gagctgggcatcgaggtgctggacgaggacgggctcaggcggctgctgcagcccaccgac ggcgccgcggcgggcagctga

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