Rahnella bonaserana: QNM34_11015
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Entry
QNM34_11015 CDS
T09076
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QNM34_11015 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbon03400
]
QNM34_11015 (nth)
Enzymes [BR:
rbon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QNM34_11015 (nth)
DNA repair and recombination proteins [BR:
rbon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QNM34_11015 (nth)
Prokaryotic type
QNM34_11015 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
P_gingi_FimA
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WHZ42756
LinkDB
All DBs
Position
complement(2430349..2430987)
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AA seq
212 aa
AA seq
DB search
MNKEKRVEILSRLRDNNPHPTTELVYTTPFELLISVLLSAQATDVSVNKATAKLYPVANT
PESILALGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTKFAPGKTVDDVEEKLLKVVPAEFKLDCHHWLI
LHGRYTCIARKPRCGSCLIEDLCESKEKVYAE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggaaaagcgtgtcgaaattctcagccgtttgcgtgacaacaacccgcatccg
acgaccgaactggtgtacaccaccccgttcgagctgttgatttcggttctgctttccgcg
caggccacggatgtcagcgtgaacaaggccacggcaaagttgtatccggtcgccaatacc
cctgaatccattctggcgctcggcgttgacggcgtgaaggaatacatcaagaccattggc
ctgttcaattctaaagccgaaaatgtgattaaaacctgtcgtatcctgctggaaaagcac
aacggtgaagtgccggaagaccgcgccgctcttgaagccctgccgggcgtcggccgtaaa
acggccaacgtggtactgaacaccgcttttggctggccgacgattgccgtggatacacac
attttccgcgtatgtaaccggacgaagtttgcaccggggaaaaccgtcgatgacgtcgaa
gagaaattactgaaagtggttccggccgagttcaaactcgattgtcatcactggctgatc
ctgcatggtcgctatacctgtattgcgcgcaagccgcggtgcgggagttgcctgattgag
gatttgtgtgagagtaaagagaaggtttatgcggagtga
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