Ruminococcaceae bacterium CPB6: B6259_02345
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Entry
B6259_02345 CDS
T04880
Name
(GenBank) hypothetical protein
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp00550
Peptidoglycan biosynthesis
rbp01100
Metabolic pathways
rbp01502
Vancomycin resistance
rbp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B6259_02345
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B6259_02345
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
B6259_02345
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rbp01002
]
B6259_02345
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbp01011
]
B6259_02345
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rbp01504
]
B6259_02345
Enzymes [BR:
rbp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
B6259_02345
Peptidases and inhibitors [BR:
rbp01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
B6259_02345
Peptidoglycan biosynthesis and degradation proteins [BR:
rbp01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
B6259_02345
Antimicrobial resistance genes [BR:
rbp01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
B6259_02345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
DUF4912
Motif
Other DBs
NCBI-ProteinID:
ARP49834
LinkDB
All DBs
Position
483344..484222
Genome browser
AA seq
292 aa
AA seq
DB search
MTGFTTEKAGKNPTGGAELNRERRTNMRKSRQEQILDEDSPRGSVAGVRHLKNWMRVVLA
AILVLAVLLGVLVWKYYMPKTNGQSSSAGSAAALAAQSTEVLSEPDDSWALTVVSQDRKI
SSSFSPQLVSFGNVQVDQRIVPSLQKMLDDAKAAGYTLSVKQGYVDAKMQESQYQAKIKT
LMQQGKTCAIAESDAAALVPPGGCSENQTGMAVTFPSDQTFLSSDGYHWLLNHCVEYGFV
RHYTDSKEGRTGLKDDPSHFRYVGTRNAKNMRRLGLCLEEYAVYVERQSSGS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtttcacgactgaaaaagcaggtaaaaacccaaccggaggtgcagaactaaac
cgggaaaggagaacgaatatgcgtaaatcccgtcaggaacaaattctggacgaagacagc
ccacgcggcagtgtcgcaggtgtccggcacttaaaaaactggatgcgggtggtattggca
gccattctggtgctggctgttctgctgggcgttcttgtctggaaatattatatgccaaaa
acaaacgggcagtcatcttctgctggctcggccgcggcgctggccgcacaaagtacggaa
gtgctgtcagaaccggacgacagctgggcactgactgttgtttcgcaggaccggaaaatc
agcagcagcttttcaccgcagctagtaagttttgggaatgtgcaggtggaccagcgcatt
gtgccttctctgcagaaaatgctggacgatgcaaaggcagccggctatacgttgtccgtc
aagcagggatatgttgatgcaaagatgcaggaaagccagtatcaggcaaaaattaaaacg
ctgatgcagcagggcaagacatgtgccattgcggaaagcgatgccgcggcgctggtgccg
ccgggcgggtgcagcgagaaccagaccggtatggctgtaacgtttccgtcagaccagacg
ttcctttccagtgacggttatcactggcttttgaaccactgcgtggagtacggctttgtg
cgccactataccgacagcaaagagggccgcactggcctcaaggacgacccgagccatttt
cgctatgtaggtacccgcaatgccaagaatatgcgtcggctgggtttgtgcctggaagag
tacgcggtttatgtggaacgccagagttccggcagctga
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