Rhizobium binae: J2J99_15025
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Entry
J2J99_15025 CDS
T07180
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rbq
Rhizobium binae
Pathway
rbq00300
Lysine biosynthesis
rbq00550
Peptidoglycan biosynthesis
rbq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J2J99_15025
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J2J99_15025
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbq01011
]
J2J99_15025
Enzymes [BR:
rbq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
J2J99_15025
Peptidoglycan biosynthesis and degradation proteins [BR:
rbq01011
]
Precursor biosynthesis
Amino acid ligase
J2J99_15025
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
Motif
Other DBs
NCBI-ProteinID:
QSY81003
LinkDB
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Position
complement(3051678..3053198)
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AA seq
506 aa
AA seq
DB search
MNIDADSRGADRLQEGKVHSMKLRDLAGDQFPELEAQLEGPAGLLDISGLSSDSRKVAPG
NAFVAVAGTKADGAGFIADAAGRGAAVAIASQAVDASIPVLAVGDPRRFLSIAAARFYGR
QPEIMVAVTGTAGKTSVASFTRQIWAHAGHAAAMIGTTGVVSPTRNEYGALTTPDPVSLH
KLLAELADEGVTHASMEASSHGLDQSRLDGVKLSAAAFTNLGRDHMDYHPTVEAYMAAKM
RLFDTLLPKGAPAVIFADDPWSAQAVKAAVDAGHDVRTVGRKGDYLTLKRVEHFRHKQTA
EIHIGDEIFEVDIALAGDFQVANALVAAGLAMSTGVEPKVAMAALEKLVGASGRLELVGH
TKDGALAYVDYAHKPEALENVLNSVRPFTTGRVFVVFGCGGDRDRGKRPIMGEIACRLAD
VVIVTDDNPRSEEPAAIRSEIMAAAACASEIGDRAAAIREAVGMLRSGDTLIVAGKGHEE
GQTVGSVTLPFSDHAEVRKALEDLKS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgacgccgattcgcgaggggcggaccggcttcaagagggaaaagtgcattcg
atgaaattgcgagacctggccggagatcagtttccggaacttgaagcacagctcgaaggc
ccggcaggcctgctcgatatttccggcctgtcttcggacagccgcaaggtggcgccgggc
aatgccttcgtcgcggtcgccggcaccaaggcggacggcgcgggcttcatcgcggatgcc
gccggacggggtgccgcagtcgcgatcgcctcccaggccgtcgatgcttctatcccggtg
cttgcggtcggagacccgcgtcgcttcctttcgatcgccgccgcgcggttctacggcagg
cagcccgagatcatggtcgccgtcaccggcactgcgggcaagacttccgtcgcctcgttc
acccggcagatctgggcgcatgcaggccacgcggccgcgatgatcggcacgacgggcgtg
gtttcaccgacgcgcaatgaatatggcgcgctgaccacgccggatcctgtctccctgcac
aagctgctggccgaacttgccgacgaaggcgtgacgcatgcgtcgatggaggcttccagc
cacggtctcgaccagagccgcctcgacggcgtgaagctttcggctgccgccttcaccaat
ctcggccgcgaccacatggattatcatccgaccgtcgaggcctatatggccgccaagatg
cggcttttcgatacattgctgccgaagggcgcgccggcggtgatctttgccgacgatccg
tggtcagcccaagccgtcaaggcggcggtcgatgccggtcacgatgttcgtaccgtcggg
cgcaagggcgattacctgacgctgaaacgtgtcgagcatttccgccacaagcagacggcc
gagatccatatcggcgacgagatattcgaagtggacattgcgctggccggcgatttccag
gtcgccaatgcgctggtcgcggcagggcttgccatgtcgaccggtgtcgagccgaaagtt
gcgatggccgcgctcgaaaaactcgtcggtgcctccggccgtctcgaactcgtcggccat
acgaaggacggcgcgcttgcttatgtcgattatgcccataagccggaagcgctggaaaac
gtgctgaattcggtccggcctttcacgacgggccgcgtcttcgtcgtcttcggctgcggc
ggcgaccgcgaccgcggcaagcggccgatcatgggcgaaatcgcctgccggctcgccgac
gtcgtcatcgtcaccgacgataatccgcgctcggaggagccggccgcgatccgctccgag
atcatggcggcagcggcttgcgcctcggaaatcggcgatcgcgccgcggcgatccgtgag
gcggtcggcatgctgagatccggcgatacgctgattgtcgccggcaagggacatgaggag
gggcagacggttgggagcgtcaccttgccgttctccgatcatgcggaggtgcgcaaggcc
ttggaggacctgaaatcttga
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