Rhizobium binae: J2J99_19490
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Entry
J2J99_19490 CDS
T07180
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rbq
Rhizobium binae
Pathway
rbq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J2J99_19490 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbq03400
]
J2J99_19490 (nth)
Enzymes [BR:
rbq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J2J99_19490 (nth)
DNA repair and recombination proteins [BR:
rbq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J2J99_19490 (nth)
Prokaryotic type
J2J99_19490 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QSY81800
LinkDB
All DBs
Position
3992677..3993483
Genome browser
AA seq
268 aa
AA seq
DB search
MGVEYRFNMANPKLKSVTRPSQNSNVIAPRKPAAAVKTAYSPAEREEIFRRFSVQRPEPR
GELEHTNPFTLVVAVALSAQATDVGVNKATRALFKVADTPEKMLDLGEERLRDYIRTIGL
YRNKAKNVIALSQMLVDEFGGQVPETRDELVKLPGVGRKTANVVLSMAFGQATMAVDTHI
FRIANRIRLAPGKTPDEVETRLMKVIPEHYLYHAHHWLILHGRYTCKARRPECERCVIAD
LCKSPEKSWDVPAPLVELPPQVIGEAVD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgagtatagattcaacatggcgaatccgaaactcaaatccgttaccagacca
tcgcaaaactcgaatgtgatcgccccccgcaagccggcggcggcagtgaagaccgcctat
tccccggccgagcgcgaggagatcttccgccggttctcggtgcagcgaccggagccgagg
ggcgagctcgagcataccaatcccttcaccctcgtcgtcgctgtcgcgctgtcggcgcag
gcgaccgatgtcggcgtcaacaaggcgacacgcgccctcttcaaggtcgccgacacgccg
gaaaagatgctcgatctcggcgaggagcggctgcgcgactatatcaggacgatcggcctc
tatcgcaacaaggcgaaaaacgtcatcgcgctctcgcagatgctggtcgacgaattcggc
ggccaggtgccggagacgcgcgacgagctggtgaagctgccgggcgtcggccgaaagacg
gccaatgtcgtgctgtccatggccttcggccaggcgacgatggcggtcgacacgcacatt
ttccgcatcgccaaccgcatccggcttgctcccggcaagacgcccgacgaggtcgagacg
cggctgatgaaggtgatccctgaacactacctctaccacgcccatcactggctgatcctg
cacggccgctatacctgcaaggcgcgccgccccgaatgcgagcgctgtgtcatcgccgat
ctctgcaaatcgccggagaagagctgggatgtgccggcgccgctcgtcgagctacctccc
caggtgatcggcgaggccgtcgactaa
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