Rhodobiaceae bacterium SMS8: RHODOSMS8_00550
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Entry
RHODOSMS8_00550 CDS
T05596
Symbol
mdtC
Name
(GenBank) multidrug resistance protein MdtC
KO
K18138
multidrug efflux pump
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs01501
beta-Lactam resistance
rbs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RHODOSMS8_00550 (mdtC)
01503 Cationic antimicrobial peptide (CAMP) resistance
RHODOSMS8_00550 (mdtC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbs02000
]
RHODOSMS8_00550 (mdtC)
01504 Antimicrobial resistance genes [BR:
rbs01504
]
RHODOSMS8_00550 (mdtC)
Transporters [BR:
rbs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RHODOSMS8_00550 (mdtC)
Antimicrobial resistance genes [BR:
rbs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RHODOSMS8_00550 (mdtC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
PPV_E2_C
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AWZ00104
UniProt:
A0A2Z4UGA3
LinkDB
All DBs
Position
complement(543721..546867)
Genome browser
AA seq
1048 aa
AA seq
DB search
MWISDISIKRPVFAVMLIGALVALGWLSLGRLGVDLFPKVEFPVVSVETRLEGASPQTVE
SELSDAIEEQVNTISGIETLSSTSSEGRSSVVIQFELDEDADAKAQDARDKVALAQGEMP
RDAEQSIVQKIDPDSQPIMSIMIAGDMPIRDLTRFADKTVKEHLQRISGVGSIRVVGGRD
REVRIWLDAVKLRSYAVTADDVISALRREHAEIPGGRLDTAGLQSEFSVKTMGEVTSVAE
FGDIVINFRADGLPTRIRDVARVEDGMEDRRSYAELDGKPGISLEVRRQSGRNTVEVAQA
IRTELDGIRALAPPGVRIVSARDTSKFIEAAANDVFDDIILGVILVIIVTLAFLLSFRAT
LIVAMAMPTALISSFFAFYVMDFTINMMTLMALSISVGLLVDDAIVVLESIYRKLDEGHP
PMEAASLGVKQVGLAVFAGTASVCAVFVPIAFMEGMVGRFFFQYGMAITFSVLVSLLTSI
TLTPMLCSRLLSEAADKRENMGRVARFFDDGYVMLEQAYKSLLGLALSYRWVVMLGAVGT
VVLGVMVARTLPIAFDSSSDRSEFLANVDLPFGTGVDQMRTIASRVAQRLSALDHVNTVF
YTIGADAQERVNEAEFYIGVTPKADRDVGIVALMDAVRAEMKASAPEAQKVSVTEVPWIS
GGGSSNFGINYAVSGADLGVLQQRTDAILARMRASGMFADVQSSFEAGKPEVQVAIDRRR
AADLGVSMRTLAESVRALVGGTDVTTYEEFGSRYDVRVRLEEDQRNDVTKLEMIQIRAAD
GRLIDIANLAQFDIDSGPAQITRQNRSRSIMIMANTPEGVSLGPATDKLEEIIAEVGLPA
GYIWSAEGEAKRMKENQQAIGFAFMVALAALYMILASQFNSFVQPVIIMLTAPLSFVGAF
IALKLSGLELTMFAQIGLLALMGLVMKNGILLVDYANHLKAETGSSHEAMLSAGPVRLRP
VLMTAFSTICGMIPVAFSDSQGAEFRNAMGFLVIGGLASSTFLTLLVVPAAYTLMDDAGV
LIRQGIDRVKGLSGEGNARGLSRFRRKL
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtggatttctgacatctccatcaaacgccctgtctttgccgtcatgctcattggcgca
ctggttgcgcttgggtggctttctcttggtcggctgggtgtcgatcttttccccaaggtg
gaatttcctgttgtctccgttgagacccgccttgaaggcgcatcgcctcagacagtggag
agcgagcttagcgacgccattgaagaacaggtcaatacgatctcgggcattgagaccctt
tcatccaccagctcggaaggccgcagctctgtcgtgatccagtttgagctggatgaagac
gcagacgcgaaagcgcaagatgcgcgggacaaggtagcccttgcccagggcgaaatgccg
cgcgatgcggagcaatccatcgtccaaaaaattgacccggattctcagcccatcatgtcg
atcatgattgccggtgacatgccgatccgcgatctgacccgttttgcggacaagaccgtc
aaagaacacttgcagcgcatctccggcgtggggtccatccgtgttgtgggtggccgcgac
cgagaagtgcggatctggttggatgcggtaaaactgcgttcctatgccgtcactgccgat
gatgtcatcagcgcattgcggcgtgaacatgctgaaattccaggcgggcgattggacaca
gccggcctgcagtctgagttctctgtgaagaccatgggcgaagtgacgtctgttgctgaa
ttcggtgacatagtcatcaacttcagagctgacgggctgcccacgcgtattcgtgatgtg
gcccgtgtggaagatgggatggaagatcgacgctcctatgcggagctcgacggcaaacct
ggcatctcactggaagtccgtcgtcaatcagggcgaaacaccgtcgaagtcgcgcaagca
atccggaccgagcttgatggcattcgcgcgctcgcccctccaggggtcaggatcgtatcc
gcccgtgacacatccaagtttattgaagctgccgccaatgatgttttcgatgacatcatt
ctgggggtcattctggtcatcattgtaacgctggccttcctgctcagcttccgggcgacg
cttattgtggccatggcgatgcccacggcgctcatctccagcttcttcgcgttttacgtg
atggacttcaccatcaacatgatgactttgatggcgctttccatttcggtggggcttctg
gttgatgatgccatcgtggtgctggaaagcatttatcgcaaactcgacgagggccacccg
cccatggaagcggcatcgctcggcgtgaaacaggtgggcctcgcggtgttcgcaggtaca
gcgtctgtgtgcgccgtcttcgtaccgatcgccttcatggaaggcatggtgggacgcttt
ttcttccagtacggcatggcgattaccttctccgtattggtctcgcttctcacttccatc
acgcttacgcccatgctctgctcgcgccttttgagtgaagctgctgataagcgggaaaat
atgggccgcgttgcccgcttctttgacgatgggtatgtgatgctcgaacaggcctacaaa
agcctgctgggcctcgcactgtcttatcgctgggtcgtgatgctgggcgcggtcggcacc
gttgtgctcggtgtcatggtcgcacgcacactccccatcgcctttgacagcagttctgat
cgatctgaatttttggcgaatgtcgacctgccctttggcaccggcgttgaccaaatgcgt
acgattgcgagccgtgtggcacaacgcctcagcgccctcgatcacgtcaacacggtcttc
tacacaatcggcgccgatgcgcaggagcgtgtcaacgaagcagagttttacatcggcgtc
acacccaaggcggaccgtgatgtgggcattgtggccctaatggatgccgtacgcgcagag
atgaaagcctcagcacccgaagcccagaaggtctcggtgacggaagtcccctggatttcc
ggcggcgggagctcgaactttggcatcaattatgccgtcagtggcgccgatctaggtgtg
ttgcaacaacgtacggacgcgatccttgcgcgcatgcgggcgagcggcatgttcgccgac
gttcaatcgagctttgaagcgggcaaacctgaagtccaggtcgccattgaccgccgccgt
gcagcagaccttggtgtcagcatgcgtactcttgcggagtccgttcgggcactcgttggc
ggcaccgacgttactacctatgaagagtttggctctcgctacgatgtgcgtgtacggctc
gaagaggatcaacgcaatgacgtcaccaagctggagatgattcagatccgcgctgcagac
gggcgcttgattgatattgccaacctcgcgcagttcgacattgactccggccctgcccaa
atcacccgacagaaccgttcccgcagcatcatgatcatggcaaacaccccggagggagtg
tctctcggccccgctacagacaagcttgaggagattatcgcggaagtcgggcttcctgcc
ggttatatctggagtgccgaaggtgaagccaaacgcatgaaggaaaaccagcaagccatc
ggctttgccttcatggtggcgctggccgcgctctatatgatcctggcgagccagttcaac
agcttcgttcagccggtcatcatcatgctcaccgcccccctttcctttgtaggggctttc
atcgcgctcaaactgtcaggtcttgagctcaccatgtttgcccagatcggtttgctcgcg
ctcatggggcttgtgatgaaaaacggcattctgctcgtggattatgccaaccatttgaaa
gcagaaaccggttcgtcccatgaagccatgctgagtgccggtcctgtgcggctgcggccg
gtccttatgaccgccttttccaccatttgcggcatgatccctgttgctttctctgatagc
cagggcgctgagttccgcaatgccatgggttttctagtgatcgggggcctcgcctcttcg
actttcctcacccttctggtcgtgcctgccgcctatacgttgatggacgatgccggggtg
ctcatacggcaaggcatagaccgcgtgaaaggcctcagtggcgagggtaacgcacgtggg
ctctcacggtttagaagaaaactctaa
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