Rhodobiaceae bacterium SMS8: RHODOSMS8_00938
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Entry
RHODOSMS8_00938 CDS
T05596
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs00900
Terpenoid backbone biosynthesis
rbs01100
Metabolic pathways
rbs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RHODOSMS8_00938 (ispF)
Enzymes [BR:
rbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
RHODOSMS8_00938 (ispF)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
RHODOSMS8_00938 (ispF)
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Motif
Pfam:
YgbB
IspD
NTP_transf_3
Hydrolase_like
Motif
Other DBs
NCBI-ProteinID:
AWZ00488
LinkDB
All DBs
Position
complement(954594..955760)
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AA seq
388 aa
AA seq
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MRVVALIVAAGRGTRAGEGLPKQYRPVGGVPILARTLGAFSRHPDIESVLAVIHPDDRAH
YERCTGDLPKLLPPVAGSATRQASVLAGLEALADVDPSHVLIHDGARPFAAPEMIGRVVA
DLKHHEGVLPSLAVTDTLREQVDGVAGETVDRSKLVRAQTPQGFAYKAILDAHRAHQSDD
FTDDVALALRAGIQTQLVDGSEDNFKVTTPEDFERAERFLSASNETRSGSGYDVHRFTDG
DHITLCGVAIPHTHSLLGHSDADVGLHAITDALLGAISAGDIGDHFPPTDPKWKGAPSRV
FLEHAATLLAGQNGRISNVDVTLICEAPKIGPHREAMRNAIAEIVSVSPDRVSVKATTTE
GLGFTGRGEGIAAQALVTVTVPRSAGME
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgttgcccttattgtcgccgcgggtcgtgggaccagagcaggcgaaggcttg
cccaagcaataccgccccgtgggcggcgtgcccatccttgcgcgcacgcttggcgctttt
agtcgccatccagacattgagagcgtccttgcggtcatccatcctgacgatcgggcacat
tacgaaagatgtactggtgatctgccgaagctgttgccgcccgttgcaggaagcgcaaca
cggcaagcatcggtgcttgctggactggaggcgttagctgacgtcgaccctagccatgtg
cttatccatgatggcgcacgcccctttgcagcaccagaaatgattggccgggtcgtcgca
gatctcaagcatcacgaaggtgtcctgcccagcctggcggtgacagacactcttcgcgag
caggtggacggggttgctggcgagacggttgatcgatccaaacttgtccgagcgcagacg
ccgcagggcttcgcatacaaagccattttggatgcacaccgggcccatcaatccgacgat
tttacagatgatgtcgcgcttgcattgagagcgggtattcaaactcagctcgtggacgga
tcagaggataatttcaaagtgacaacgccggaagatttcgagagagcggagcgtttcttg
agcgcctctaacgaaacacggtcagggtccggatatgacgtgcatcggttcaccgacggc
gaccacatcactttgtgtggtgtggccatcccccatacacacagcctgttggggcattcc
gacgctgacgttggactgcatgcgatcaccgacgctttactcggtgcaatcagcgccggt
gacattggcgatcattttccgcccacggacccaaagtggaagggagcgccctcgagggtt
ttcctcgagcatgcagccacattgttggccggccaaaatggtcgaatttcaaatgtggat
gtcacgctcatttgcgaagcgccgaagatcggccctcacagagaggctatgcgtaatgca
atcgcagagatcgtcagcgtctcgccagatagggtgagcgttaaagcgacaacaactgaa
ggccttggtttcacaggccgtggtgagggcattgccgcgcaagcccttgtcacggtcacg
gtccctagatcggcgggcatggaatga
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