Rhodobiaceae bacterium SMS8: RHODOSMS8_01011
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Entry
RHODOSMS8_01011 CDS
T05596
Symbol
mcl
Name
(GenBank) malyl-CoA/beta-methylmalyl-CoA/citramalyl-CoA lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs00630
Glyoxylate and dicarboxylate metabolism
rbs00660
C5-Branched dibasic acid metabolism
rbs00680
Methane metabolism
rbs00720
Other carbon fixation pathways
rbs01100
Metabolic pathways
rbs01120
Microbial metabolism in diverse environments
rbs01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RHODOSMS8_01011 (mcl)
00660 C5-Branched dibasic acid metabolism
RHODOSMS8_01011 (mcl)
09102 Energy metabolism
00720 Other carbon fixation pathways
RHODOSMS8_01011 (mcl)
00680 Methane metabolism
RHODOSMS8_01011 (mcl)
Enzymes [BR:
rbs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
RHODOSMS8_01011 (mcl)
4.1.3.25 (S)-citramalyl-CoA lyase
RHODOSMS8_01011 (mcl)
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Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
DUF6986
C-C_Bond_Lyase
Motif
Other DBs
NCBI-ProteinID:
AWZ00560
UniProt:
A0A2Z4UI18
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All DBs
Position
1017017..1018060
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AA seq
347 aa
AA seq
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MKLPASFYKPLSIGAPAPFQELPLALERMIHFFPAHNEKVHSKIPDLIPKVDVILGNLED
AIPADAKEAARAGFIKVAQENDFGNTGLWTRVNALNSPWALDDIVEIVSAVGDKLDVIML
PKVEGVWDIHYADQLLAQLEAKHGVKKPILIHAILETAQGVKNVNEIAAASPRMHGMSLG
PADLAASRGMKTTRVGGGHPSYGVIEDPKEDGSSRVFAQQDLWHYTVARMVDACLSNGIR
PFYGPFGDIQDTDACEVQFRNSFLLGCVGAWSLHPVQIDIAKKVFSPDVDEVKFALRILE
AMPDGTGAVMLDGKMQDDATWKQAKVIVDLAKRVAERDPELGKAYGL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcccagcttcattctataagcccctgtcaattggtgcgccggcacccttccaa
gagctgccattggcgctggaacgaatgatccacttcttcccagcgcataacgagaaggtt
cattctaaaattccagatctcattccgaaggtcgatgtgattcttgggaacctggaagac
gcaatacccgctgatgcaaaagaagcggctcgagctggtttcatcaaggttgcgcaggag
aatgactttgggaacacgggcctttggactcgggtcaatgcactgaacagcccttgggcg
ttggacgacattgttgagattgtcagcgccgttggcgacaagctcgacgtgattatgctg
cccaaagtggaaggtgtttgggacatccactacgcagaccaactgttggctcagcttgaa
gcaaaacatggcgttaaaaagcctatccttattcacgccatcctggagacagcgcaaggc
gtaaaaaatgtgaatgagattgcggcggcgagcccgcgcatgcatggcatgagcttgggt
cctgccgatcttgccgcatcacggggaatgaaaaccacgcgtgttggcggcggacatccg
tcctacggcgtgattgaagatccaaaagaagatggaagcagtcgggtctttgcgcagcag
gatctttggcactacacagttgctcgtatggtagacgcgtgcctctccaacggtattcgt
cccttctacggtccattcggcgatattcaggacacggatgcctgtgaagttcagttccgc
aactccttcctactcggatgcgttggcgcctggtcgttgcacccagtccagattgatatc
gcgaagaaagttttcagcccggatgtggacgaagtgaagttcgctctgcgcattctggaa
gccatgccggatggcacgggcgctgtaatgctcgatggcaagatgcaggacgatgcaacc
tggaaacaggctaaggtgatcgtcgatttggcgaaacgcgtcgcagaacgggatcctgag
cttggcaaagcttacggtctttaa
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