Rhodobiaceae bacterium SMS8: RHODOSMS8_03147
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Entry
RHODOSMS8_03147 CDS
T05596
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHODOSMS8_03147 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbs03400
]
RHODOSMS8_03147 (nth)
Enzymes [BR:
rbs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RHODOSMS8_03147 (nth)
DNA repair and recombination proteins [BR:
rbs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHODOSMS8_03147 (nth)
Prokaryotic type
RHODOSMS8_03147 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
EndIII_4Fe-2S
HHH_5
HHH_8
Opy2
Motif
Other DBs
NCBI-ProteinID:
AWZ02657
UniProt:
A0A2Z4UN67
LinkDB
All DBs
Position
complement(3160407..3161051)
Genome browser
AA seq
214 aa
AA seq
DB search
MKMKKKDIEPFFEILSADLPEPKTELDYKNPYTLVVAVALSAQATDVGVNKATKELFKKV
DTPEKMVKLGEAKLRDQIKTIGLYRNKAKNVIAMSKMLINEFNSDVPRTREELERLPGVG
RKTANVVMNEAFGEATIAVDTHIFRVSNRTGLAPGKNVLEVEHELLKRVPKDYLQHAHHW
ILLHGRYVCKARKPDCPSCKVVDYCGFKGKTTAA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaagaaaaaagacattgagccgttttttgagatcctgtccgcggatttgccg
gaacccaaaacagaacttgattacaaaaacccctacacactcgtggtcgctgtggcccta
tcggcccaagcgactgatgtgggcgtaaacaaagccactaaagagcttttcaaaaaagtc
gatacgcctgagaagatggtgaagctcggtgaagccaagttgcgcgaccagatcaagacc
atcgggctttaccggaacaaagcaaaaaacgtcatcgcgatgtccaagatgctcatcaat
gagtttaacagcgacgtgccgcgcacccgcgaagaactggagcgcctgccaggcgttggg
cgcaagaccgccaatgtcgtgatgaatgaagcctttggcgaagcgaccattgctgtcgac
acgcatatcttccgcgtctcaaaccgcacggggctcgcaccaggaaaaaacgtgcttgag
gttgagcacgaactcctcaagcgcgtgcccaaagactatctgcagcatgcccatcactgg
atccttctgcacggccgctatgtgtgtaaggcgcggaaacccgactgcccgtcctgcaaa
gtcgtcgactattgtggcttcaaaggaaaaacaacggcggcctag
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