KEGG   Aestuarium zhoushanense: B9057_06600
Entry
B9057_06600       CDS       T05514                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
rbz  Aestuarium zhoushanense
Pathway
rbz03030  DNA replication
rbz03410  Base excision repair
rbz03420  Nucleotide excision repair
rbz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rbz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B9057_06600
   03410 Base excision repair
    B9057_06600
   03420 Nucleotide excision repair
    B9057_06600
   03430 Mismatch repair
    B9057_06600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rbz03032]
    B9057_06600
   03400 DNA repair and recombination proteins [BR:rbz03400]
    B9057_06600
Enzymes [BR:rbz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     B9057_06600
DNA replication proteins [BR:rbz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B9057_06600
DNA repair and recombination proteins [BR:rbz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     B9057_06600
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B9057_06600
   MMR (mismatch excision repair)
    DNA ligase
     B9057_06600
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B9057_06600
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT DNA_ligase_ZBD HHH_2 PTCB-BRCT Nlig-Ia Zn_ribbon_ISL3 Zn_ribbon_NUD Zn_Ribbon_TF
Other DBs
NCBI-ProteinID: AUJ64000
LinkDB
Position
1317686..1319950
AA seq 754 aa
MGKSVTQSATATIAVEQLTNDQAAEELARLADVLARANAAYHTADAPDISDAEYDALKRR
NAAIEARFPDLKRSDSPSEQVGAAVGDGFGKIAHAVRMLSLSNAFDDDDVADFDEQVRKY
LGTDEAISYTAEPKIDGLSLSLRYENGILVQAATRGDGEVGENVTENAKTISDIPHQIVG
APAVIEVRGEVYMSHADFAALNERHAATGGKTFANPRNAAAGSLRQLDAEITRARPLRFF
AYAWGEVSEPLGDTQFDAIERFKALGFQVNPLTRLCASTAEMISHYRDIEAQRATLGYDI
DGVVYKVNGLNLQRRLGFRSTTPRWAIAHKFPAELAWTRLEAIDIQVGRTGALSPVARLQ
PVTVGGVVVSNATLHNEDYIAGRDSNGHPIRDGKDIRIGDWVQVYRAGDVIPKIADLDLA
KRPDDAEPFAFPHVCPECGSEAIRDEGDSVRRCTGGLVCPAQAVERLKHFVSRGAFDIEG
LGAKQIEMFHNDPVLPINEPADIFTLAKRDAQNLARLKNRDGFGEKSANKLFEAIEQKRK
IPFGKFLFALGIRHLGEVAGADLARHFVTWNALVQTADAARMAAQCEVMAEEAEAQERAL
AEAQGRRANIKKSRETAWANCTAEALAAWNEFTSIDGIGAVLAVSLITTLSQPEERAVID
RLVAELDIQAPEQRSNDSPVAGKTVVFTGSLEKMTRAEAKARAESLGAKVAGSVSAKTDL
LVAGPGAGSKAKKAEELGIETIDEDGWLALIGDA
NT seq 2265 nt   +upstreamnt  +downstreamnt
atggggaagagcgtgacgcaatcggccacagcgacaatcgcggtagagcagcttacaaat
gatcaagcagccgaggaattggcgcgtcttgccgatgttttggcgcgggcgaatgcggct
tatcatactgcagatgctccagatatttcggatgcggagtatgacgcgctcaagcggcgc
aatgctgcgattgaggctcgttttcctgacctgaaacgttccgatagcccgtccgaacag
gttggtgcggctgtcggcgatgggtttggcaaaatcgcgcatgctgttcgcatgctgtcc
ttgtcgaacgcgtttgacgacgatgatgttgccgattttgatgaacaagtgcgcaaatac
ctcggtacggacgaggcgatctcttacaccgctgagcctaagattgacgggctttcattg
tcgctaaggtatgagaacgggattttggttcaggccgcgacacgtggcgacggcgaggtc
ggtgaaaacgtcaccgagaacgcaaagacgatttcagatattccgcatcagatcgtgggc
gcaccagccgtgatcgaagttcgcggcgaagtctatatgagccacgcggatttcgccgcg
ctgaacgaacgccatgccgcgacaggggggaaaacctttgcgaacccgcgaaatgctgcc
gcagggagccttcgtcagctagacgcagagatcacgcgtgcccgtccgcttcggtttttt
gcctatgcttggggtgaggtcagtgagccgcttggtgatactcagtttgatgcaattgag
agatttaaggcattgggatttcaagtaaatcctttaacgcgtctgtgtgcgtccaccgca
gaaatgatcagccattaccgagatattgaagcgcagagagcaacgctcggctacgacatc
gatggtgtggtttataaggtgaacggtctgaacctccagcgccgtctcgggttccgatca
acaacgccgcgttgggcgattgcgcataagttccctgctgaactggcgtggacgcggctt
gaggcgatcgacattcaggttggtcgaacaggggctttgtcgcctgtggcacgcctacag
cccgtgacggtcggcggggtcgttgtgtcgaacgcgaccctccataacgaggattacatt
gcgggtcgtgacagcaatggtcaccccattcgcgatggcaaagacattcgtattggggac
tgggtgcaggtctaccgcgcgggcgacgtgatccccaaaattgccgaccttgatctggcg
aaacgtcccgatgatgctgagcctttcgcgtttccgcatgtatgcccagaatgtgggtcc
gaagcgatccgcgacgagggagactcggttcggcgttgtacgggcggtttggtatgccct
gcgcaggctgttgaacggctcaagcatttcgtatcgcgtggggcatttgatatcgaaggc
ctcggcgcaaaacagatcgaaatgttccacaacgatccggtgctcccgatcaatgaacct
gccgatatttttacgctcgcgaaacgtgacgcacagaacttggcgcgtttgaaaaaccgt
gacggctttggtgaaaagagcgcgaataagctgtttgaagcgattgaacagaaacggaaa
ataccgtttggaaagttcttgtttgctctcggtattcgccacctaggtgaggtcgcaggt
gccgatcttgctcgtcatttcgttacctggaatgccttggttcaaacggcagatgctgcc
cgcatggccgcgcaatgcgaagtcatggctgaggaggcagaagcccaagaacgcgcgttg
gctgaggcgcaaggccgtcgggcgaatattaagaaatcgcgcgaaacagcttgggcgaat
tgtactgctgaggcacttgcagcatggaatgagtttacgtcaatcgatgggatcggggct
gttttggcggtgtccttgatcaccacgctgtcccaacccgaagagcgggccgtcattgac
cgattggtggccgagcttgacattcaagcgccagaacaacgatccaacgacagtcctgtt
gcgggtaaaacggtggtctttaccggttcgctcgagaagatgacacgggcagaggcaaag
gcgcgagctgaatcgttgggcgcgaaggtggcgggctcggtcagtgcaaaaaccgatttg
ctggtcgcgggcccaggtgccgggtccaaggcgaaaaaggccgaagaactgggcattgag
accatcgacgaagatggttggctcgcgttgattggggacgcatga

DBGET integrated database retrieval system